RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 PRRT4C9JH25 899 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 TNNT1P13805 278 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 HNRNPLP14866 589 aaKnown RBP eCLIP14.14□□□□□ -0.15
PTCH1-213ENST00000546820 GOT1P17174 413 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 TIE1P35590 1138 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 NNMTP40261 264 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 IRAK1P51617 712 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 NUBP1P53384 320 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 TAS2R40P59535 323 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 MESP2Q0VG99 397 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 ATP13A4Q4VNC1 1196 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 C2orf27AQ580R0 203 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 PITRM1Q5JRX3 1037 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 MBLAC2Q68D91 279 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 TXNRD3NBQ6F5E7 133 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 MAMSTRQ6ZN01 415 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 ADIPOR2Q86V24 386 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 NLRP14Q86W24 1093 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 SPEM1Q8N4L4 309 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 ZNF513Q8N8E2 541 aaPredicted RBP14.14□□□□□ -0.15
PTCH1-213ENST00000546820 RTL3Q8N8U3 475 aaKnown RBP14.14□□□□□ -0.15
PTCH1-213ENST00000546820 WFDC5Q8TCV5 224 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 USP33Q8TEY7 942 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 TTC17Q96AE7 1141 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 ACDQ96AP0 544 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 LMLNQ96KR4 655 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 MAGEH1Q9H213 219 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 C11orf16Q9NQ32 467 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 CWC15Q9P013 229 aaKnown RBP14.14□□□□□ -0.15
PTCH1-213ENST00000546820 DNAI1Q9UI46 699 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 VPS28Q9UK41 221 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 AMFRQ9UKV5 643 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 HPCAL4Q9UM19 191 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 PPP2R2CQ9Y2T4 447 aa14.14□□□□□ -0.15
PTCH1-213ENST00000546820 MIA3Q5JRA6 1907 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 PSTPIP1O43586 416 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 DLDP09622 509 aaKnown RBP14.13□□□□□ -0.15
PTCH1-213ENST00000546820 ERCC2P18074 760 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 KDELR1P24390 212 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 NTSR1P30989 418 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 CSKP41240 450 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 KIR2DL1P43626 348 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-213ENST00000546820 YBEYP58557 167 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-213ENST00000546820 ST8SIA6P61647 398 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 GNA12Q03113 381 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 POLD3Q15054 466 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-213ENST00000546820 PLEKHG6Q3KR16 790 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 EOGTQ5NDL2 527 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 ARTNQ5T4W7 220 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 EMC10Q5UCC4 262 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 CXorf57Q6NSI4 855 aaKnown RBP14.13□□□□□ -0.15
PTCH1-213ENST00000546820 LZTR1Q8N653 840 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 RPLP0P6Q8NHW5 317 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 FAM71BQ8TC56 605 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 EZH1Q92800 747 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-213ENST00000546820 SPON2Q9BUD6 331 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 C2orf49Q9BVC5 232 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-213ENST00000546820 CALN1Q9BXU9 219 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 MAK16Q9BXY0 300 aaKnown RBP14.13□□□□□ -0.15
PTCH1-213ENST00000546820 PCDH18Q9HCL0 1135 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 LZTFL1Q9NQ48 299 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 SPATA6Q9NWH7 488 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-213ENST00000546820 DLGAP2Q9P1A6 1054 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 SLC8A2Q9UPR5 921 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 HYOU1Q9Y4L1 999 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 VCANP13611 3396 aa14.13□□□□□ -0.15
PTCH1-213ENST00000546820 CCDC66A2RUB6 948 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 ZBTB24O43167 697 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-213ENST00000546820 RAMP2O60895 175 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 PALMO75781 387 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 ZRANB2O95218 330 aaKnown RBP eCLIP14.12□□□□□ -0.15
PTCH1-213ENST00000546820 SRPRAP08240 638 aaKnown RBP14.12□□□□□ -0.15
PTCH1-213ENST00000546820 MZF1P28698 734 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-213ENST00000546820 CETN2P41208 172 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 CXCL12P48061 93 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 CCR3P51677 355 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 NDST2P52849 883 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 ECT2LQ008S8 904 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 SLC20A2Q08357 652 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 FUT11Q495W5 492 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 TMEM215Q68D42 235 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 IL31Q6EBC2 164 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 PEX26Q7Z412 305 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 VSIG1Q86XK7 387 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 CPNE8Q86YQ8 564 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 SFTPA1Q8IWL2 248 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 RCOR2Q8IZ40 523 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 CHPFQ8IZ52 775 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 APCDD1Q8J025 514 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 UMODL1-AS1Q8N2C9 162 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 TMEM105Q8N8V8 129 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 KDM1BQ8NB78 822 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 DTWD2Q8NBA8 298 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 CSPG4P5Q96PW8 444 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 ALS2CR12Q96Q35 445 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 ZNF670Q9BS34 389 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 LRFN3Q9BTN0 628 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 PRDM16Q9HAZ2 1276 aa14.12□□□□□ -0.15
PTCH1-213ENST00000546820 THAP10Q9P2Z0 257 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-213ENST00000546820 ZNF212Q9UDV6 495 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms