RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 GPATCH2LQ9NWQ4 482 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 C2orf42Q9NWW7 574 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 ZNF212Q9UDV6 495 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 STON1Q9Y6Q2 735 aa17.28■□□□□ 0.36
CCDC38-203ENST00000546803 ILVBLA1L0T0 632 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 CREB3O43889 395 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 APBB3O95704 486 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 TDGF1P13385 188 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 IL1R2P27930 398 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 MZF1P28698 734 aaPredicted RBP17.27■□□□□ 0.36
CCDC38-203ENST00000546803 TPI1P60174 286 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 SLC25A11Q02978 314 aaKnown RBP17.27■□□□□ 0.36
CCDC38-203ENST00000546803 ZNF234Q14588 700 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 RNF219Q5W0B1 726 aaPredicted RBP17.27■□□□□ 0.36
CCDC38-203ENST00000546803 APCDD1Q8J025 514 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 TXLNBQ8N3L3 684 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 SORCS1Q8WY21 1168 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 CALR3Q96L12 384 aaKnown RBP17.27■□□□□ 0.36
CCDC38-203ENST00000546803 MUC3BQ9H195 1237 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 POLMQ9NP87 494 aaPredicted RBP17.27■□□□□ 0.36
CCDC38-203ENST00000546803 ZDHHC4Q9NPG8 344 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 CACNA2D2Q9NY47 1150 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 NEU3Q9UQ49 428 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 OR51B4Q9Y5P0 310 aa17.27■□□□□ 0.36
CCDC38-203ENST00000546803 CCDC163A0A0D9SF12 145 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 WASH4PA8MWX3 477 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 H0Y858 1186 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 EEF2KO00418 725 aaKnown RBP17.26■□□□□ 0.35
CCDC38-203ENST00000546803 FGF10O15520 208 aaPredicted RBP17.26■□□□□ 0.35
CCDC38-203ENST00000546803 ZBTB24O43167 697 aaPredicted RBP17.26■□□□□ 0.35
CCDC38-203ENST00000546803 ALDH1A2O94788 518 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 SRPRAP08240 638 aaKnown RBP17.26■□□□□ 0.35
CCDC38-203ENST00000546803 RARAP10276 462 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 HOXB2P14652 356 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 ETFBP38117 255 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 IL12RB1P42701 662 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 SSR1P43307 286 aaKnown RBP17.26■□□□□ 0.35
CCDC38-203ENST00000546803 NOP2P46087 812 aaKnown RBP17.26■□□□□ 0.35
CCDC38-203ENST00000546803 HCAR3P49019 387 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 VASPP50552 380 aaPredicted RBP17.26■□□□□ 0.35
CCDC38-203ENST00000546803 ST8SIA6P61647 398 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 ECT2LQ008S8 904 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 MESDQ14696 234 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 STARD3Q14849 445 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 DPYSL2Q16555 572 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 CA9Q16790 459 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 PTPRNQ16849 979 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 DAB2IPQ5VWQ8 1189 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 TSSK4Q6SA08 328 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 SERPINA13PQ6UXR4 307 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 TMEM92Q6UXU6 159 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 RTL3Q8N8U3 475 aaKnown RBP17.26■□□□□ 0.35
CCDC38-203ENST00000546803 TSTD1Q8NFU3 115 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 OR52K2Q8NGK3 314 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 CYB5D2Q8WUJ1 264 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 ANP32BQ92688 251 aaKnown RBP17.26■□□□□ 0.35
CCDC38-203ENST00000546803 NELL1Q92832 810 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 C2orf49Q9BVC5 232 aaPredicted RBP17.26■□□□□ 0.35
CCDC38-203ENST00000546803 TMEM245Q9H330 911 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 ZWILCHQ9H900 591 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 VPS28Q9UK41 221 aa17.26■□□□□ 0.35
CCDC38-203ENST00000546803 BTNL10A8MVZ5 291 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 SYNCRIPO60506 623 aaKnown RBP17.25■□□□□ 0.35
CCDC38-203ENST00000546803 KRT7P08729 469 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 TCF4P15884 667 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 NNMTP40261 264 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 WASP42768 502 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 SLC1A1P43005 524 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 VAV2P52735 878 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 GNA12Q03113 381 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 SMTNL2Q2TAL5 461 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 FNDC3BQ53EP0 1204 aaKnown RBP17.25■□□□□ 0.35
CCDC38-203ENST00000546803 KCNT1Q5JUK3 1230 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 DCAF4L2Q8NA75 395 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 HSPH1Q92598 858 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 HHIPQ96QV1 700 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 KCTD15Q96SI1 283 aaPredicted RBP17.25■□□□□ 0.35
CCDC38-203ENST00000546803 MAGEH1Q9H213 219 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.25■□□□□ 0.35
CCDC38-203ENST00000546803 POLR3BQ9NW08 1133 aaPredicted RBP17.25■□□□□ 0.35
CCDC38-203ENST00000546803 ZSCAN32Q9NX65 697 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 EBF1Q9UH73 591 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 SUN2Q9UH99 717 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 ERVW-1Q9UQF0 538 aa17.25■□□□□ 0.35
CCDC38-203ENST00000546803 REXO2Q9Y3B8 237 aaKnown RBP17.25■□□□□ 0.35
CCDC38-203ENST00000546803 KMT2EQ8IZD2 1858 aa17.24■□□□□ 0.35
CCDC38-203ENST00000546803 MYOFQ9NZM1 2061 aa17.24■□□□□ 0.35
CCDC38-203ENST00000546803 A0A1W2PQF6 199 aa17.24■□□□□ 0.35
CCDC38-203ENST00000546803 TMEM110-MUSTN1A8MSY1 372 aa17.24■□□□□ 0.35
CCDC38-203ENST00000546803 H3BRJ5 948 aa17.24■□□□□ 0.35
CCDC38-203ENST00000546803 ARHGAP6O43182 974 aa17.24■□□□□ 0.35
CCDC38-203ENST00000546803 DAPK3O43293 454 aa17.24■□□□□ 0.35
CCDC38-203ENST00000546803 NRDCO43847 1150 aa17.24■□□□□ 0.35
CCDC38-203ENST00000546803 RAMP2O60895 175 aa17.24■□□□□ 0.35
CCDC38-203ENST00000546803 ARL4AP40617 200 aa17.24■□□□□ 0.35
CCDC38-203ENST00000546803 YBEYP58557 167 aaPredicted RBP17.24■□□□□ 0.35
CCDC38-203ENST00000546803 PPP6R3Q5H9R7 873 aaPredicted RBP17.24■□□□□ 0.35
CCDC38-203ENST00000546803 TXNRD3NBQ6F5E7 133 aa17.24■□□□□ 0.35
CCDC38-203ENST00000546803 ZC3H14Q6PJT7 736 aaKnown RBP17.24■□□□□ 0.35
CCDC38-203ENST00000546803 RFX8Q6ZV50 586 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms