RNA–Protein interactions for RNA: ENST00000546619.5

CALCOCO1-204, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-204ENST00000546619 SMG1Q96Q15 3661 aaKnown RBP15.71■□□□□ 0.1
CALCOCO1-204ENST00000546619 TBC1D3DA0A087WVF3 549 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 TBC1D3IA0A087WXS9 549 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 TBC1D3EA0A087X179 549 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 TBC1D3KA0A087X1G2 549 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 A0A1W2PR77 199 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 TBC1D3FA6NER0 549 aaPredicted RBP15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 TBC1D3LB9A6J9 549 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 E9PAM4 449 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 F5H5T6 163 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 RFPL3O75679 317 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 TBC1D3HP0C7X1 549 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 JUPP14923 745 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 CD44P16070 742 aaKnown RBP15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 MZF1P28698 734 aaPredicted RBP15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 EPHA8P29322 1005 aaPredicted RBP15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 NNMTP40261 264 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 RPL34P49207 117 aaKnown RBP15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 CLDN6P56747 220 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 DNAJC3Q13217 504 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 ELAVL3Q14576 367 aaKnown RBP15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 TBC1D3GQ6DHY5 549 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 TBC1D3CQ6IPX1 549 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 KLHL10Q6JEL2 608 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 TBC1D3Q8IZP1 549 aaPredicted RBP15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 PTPRN2Q92932 1015 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 BTN2A3PQ96KV6 586 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 KREMEN1Q96MU8 473 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 DCBLD2Q96PD2 775 aa15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 BBC3Q96PG8 261 aaPredicted RBP15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 TPX2Q9ULW0 747 aaKnown RBP15.7■□□□□ 0.1
CALCOCO1-204ENST00000546619 EIF4E1BA6NMX2 242 aaKnown RBP15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 C10orf142B7Z368 130 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 E5RJQ4 531 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 TLR4O00206 839 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 TRUB2O95900 331 aaKnown RBP15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 VAV1P15498 845 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 PDGFRAP16234 1089 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 NXPH1P58417 271 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 PPP2CBP62714 309 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 YWHAZP63104 245 aaKnown RBP15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 PPP2CAP67775 309 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 SLC12A1Q13621 1099 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 C6orf118Q5T5N4 469 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 CIR1Q86X95 450 aaPredicted RBP15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 ATP6V0D2Q8N8Y2 350 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 EHBP1Q8NDI1 1231 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 STK32AQ8WU08 396 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 CRELD1Q96HD1 420 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 SLC4A5Q9BY07 1137 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 POPDC2Q9HBU9 364 aa15.69■□□□□ 0.1
CALCOCO1-204ENST00000546619 COL5A1P20908 1838 aaPredicted RBP15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 KCNU1A8MYU2 1149 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 MED7O43513 233 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 LATO43561 262 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 LETM1O95202 739 aaPredicted RBP15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 C1SP09871 688 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 CDK4P11802 303 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 DRD3P35462 400 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 PPP1R2P41236 205 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 ABCG1P45844 678 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 ACADVLP49748 655 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 METAP1P53582 386 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 PITX1P78337 314 aaPredicted RBP15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 SULT2A1Q06520 285 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 RABGAP1LQ5R372 815 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 NAPEPLDQ6IQ20 393 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 TTI2Q6NXR4 508 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 CCAR2Q8N163 923 aaKnown RBP15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 OXR1Q8N573 874 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 NELFBQ8WX92 580 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 SPAG5Q96R06 1193 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 MED15Q96RN5 788 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 INTS2Q9H0H0 1204 aaKnown RBP15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 FAM204AQ9H8W3 233 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 SLC12A6Q9UHW9 1150 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 CYTH4Q9UIA0 394 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 MAN1B1Q9UKM7 699 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 CNTN6Q9UQ52 1028 aa15.68■□□□□ 0.1
CALCOCO1-204ENST00000546619 TP53BP1Q12888 1972 aaPredicted RBP15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 THAP12O43422 761 aa15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 RTN2O75298 545 aa15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 IGLV3-25P01717 112 aa15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 MAT2AP31153 395 aaKnown RBP15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 KCNH2Q12809 1159 aa15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 BNIP3Q12983 259 aa15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 MEA1Q16626 185 aa15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 HES3Q5TGS1 186 aa15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 TTC39BQ5VTQ0 682 aaPredicted RBP15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 DSG4Q86SJ6 1040 aa15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 TMEM110Q86TL2 294 aa15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 PRPF39Q86UA1 669 aaKnown RBP15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 TRIM59Q8IWR1 403 aa15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 MFSD2AQ8NA29 543 aa15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 PIP4K2CQ8TBX8 421 aa15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 FRS2Q8WU20 508 aa15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 OR8D1Q8WZ84 308 aa15.67■□□□□ 0.1
CALCOCO1-204ENST00000546619 RNF34Q969K3 372 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms