RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 APCDD1Q8J025 514 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 FAM172AQ8WUF8 416 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 RLN3Q8WXF3 142 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 MS4A3Q96HJ5 214 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 MCEEQ96PE7 176 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 CNPY3Q9BT09 278 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 ISCUQ9H1K1 167 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 OSBPL2Q9H1P3 480 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 RETREG1Q9H6L5 497 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 PRDM16Q9HAZ2 1276 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 TMPRSS4Q9NRS4 437 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 PARVAQ9NVD7 372 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 USP36Q9P275 1121 aaKnown RBP12.22□□□□□ -0.45
YBX3-217ENST00000546164 PPARGC1AQ9UBK2 798 aaKnown RBP12.22□□□□□ -0.45
YBX3-217ENST00000546164 ZNF212Q9UDV6 495 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 ERVW-1Q9UQF0 538 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 INVSQ9Y283 1065 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 LUC7L2Q9Y383 392 aaKnown RBP12.22□□□□□ -0.45
YBX3-217ENST00000546164 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.22□□□□□ -0.451e-7■□□□□ 9.3
YBX3-217ENST00000546164 OR51B4Q9Y5P0 310 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 SNX10Q9Y5X0 201 aa12.22□□□□□ -0.45
YBX3-217ENST00000546164 GON4LQ3T8J9 2241 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 BCLAF3A2AJT9 711 aaKnown RBP12.21□□□□□ -0.45
YBX3-217ENST00000546164 CCP110O43303 1012 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 RTN2O75298 545 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 CNTN5O94779 1100 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 FTLP02792 175 aaPredicted RBP12.21□□□□□ -0.45
YBX3-217ENST00000546164 SERPING1P05155 500 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 MYBL1P10243 752 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 SKILP12757 684 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 MZF1P28698 734 aaPredicted RBP12.21□□□□□ -0.45
YBX3-217ENST00000546164 LMNB2Q03252 620 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 ZBTB16Q05516 673 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 SPEM2Q0P670 501 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 RAB6CQ53S08 254 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 TDRD12Q587J7 1177 aaKnown RBP12.21□□□□□ -0.45
YBX3-217ENST00000546164 SPECC1LQ69YQ0 1117 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 DCUN1D2Q6PH85 259 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 KIAA1324Q6UXG2 1013 aaKnown RBP12.21□□□□□ -0.45
YBX3-217ENST00000546164 LPCAT2Q7L5N7 544 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 SETD3Q86TU7 594 aaPredicted RBP12.21□□□□□ -0.45
YBX3-217ENST00000546164 KIAA2013Q8IYS2 634 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 FRMD1Q8N878 549 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 OR52K2Q8NGK3 314 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 FNIP1Q8TF40 1166 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 PRCCQ92733 491 aaPredicted RBP12.21□□□□□ -0.45
YBX3-217ENST00000546164 TRIM11Q96F44 468 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 SIPA1Q96FS4 1042 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 FEM1AQ9BSK4 669 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 RAB6CQ9H0N0 254 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 SLC6A17Q9H1V8 727 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 PRSS16Q9NQE7 514 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 ITM2CQ9NQX7 267 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 SEMA4GQ9NTN9 838 aa12.21□□□□□ -0.45
YBX3-217ENST00000546164 DCHS1Q96JQ0 3298 aa12.21□□□□□ -0.46
YBX3-217ENST00000546164 TARSL2A2RTX5 802 aaKnown RBP12.2□□□□□ -0.46
YBX3-217ENST00000546164 TMCO5BA8MYB1 307 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 ZNF806P0C7X5 589 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 MPLP40238 635 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 CTSOP43234 321 aaPredicted RBP12.2□□□□□ -0.46
YBX3-217ENST00000546164 AIF1P55008 147 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 OGDHQ02218 1023 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 TRIM14Q14142 442 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 C6orf118Q5T5N4 469 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 RNF219Q5W0B1 726 aaPredicted RBP12.2□□□□□ -0.46
YBX3-217ENST00000546164 ZNF783Q6ZMS7 281 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 VPS36Q86VN1 386 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 DRC7Q8IY82 874 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 CCDC185Q8N715 623 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 ZNF366Q8N895 744 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 RNF214Q8ND24 703 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 ZYG11BQ9C0D3 744 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 RSPH9Q9H1X1 276 aaPredicted RBP12.2□□□□□ -0.46
YBX3-217ENST00000546164 ARRDC1-AS1Q9H2J1 176 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 VPS45Q9NRW7 570 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 MPP6Q9NZW5 540 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 OR12D3Q9UGF7 316 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 ADAMTS1Q9UHI8 967 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 USP18Q9UMW8 372 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 CYP8B1Q9UNU6 501 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 LAMA1P25391 3075 aa12.2□□□□□ -0.46
YBX3-217ENST00000546164 EDDM13A0A1B0GTR0 161 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 ILVBLA1L0T0 632 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 TMEM191CA6NGB0 347 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 PRR5-ARHGAP8B1AHC4 643 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 MAP3K13O43283 966 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 AP5Z1O43299 807 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 ATP9BO43861 1147 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 SRGAP2O75044 1071 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 RHOCP08134 193 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 PLEKP08567 350 aaPredicted RBP12.19□□□□□ -0.46
YBX3-217ENST00000546164 DESP17661 470 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 CD6P30203 668 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 OXTRP30559 389 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 CASP14P31944 242 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 NNMTP40261 264 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 DPP6P42658 865 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 TPMTP51580 245 aa12.19□□□□□ -0.46
YBX3-217ENST00000546164 RPS14P62263 151 aaKnown RBP12.19□□□□□ -0.46
YBX3-217ENST00000546164 ARHGAP8P85298 464 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms