RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PGAM4Q8N0Y7 254 aa8.95□□□□□ -0.98
TDP1-204ENST00000545686 C12orf29Q8N999 325 aa8.95□□□□□ -0.98
TDP1-204ENST00000545686 MPP4Q96JB8 637 aa8.95□□□□□ -0.98
TDP1-204ENST00000545686 LENG8Q96PV6 779 aaPredicted RBP8.95□□□□□ -0.98
TDP1-204ENST00000545686 ILKAPQ9H0C8 392 aaPredicted RBP8.95□□□□□ -0.98
TDP1-204ENST00000545686 SMARCAD1Q9H4L7 1026 aa8.95□□□□□ -0.98
TDP1-204ENST00000545686 ZNF385DQ9H6B1 395 aa8.95□□□□□ -0.98
TDP1-204ENST00000545686 TIMMDC1Q9NPL8 285 aa8.95□□□□□ -0.98
TDP1-204ENST00000545686 THEGQ9P2T0 379 aa8.95□□□□□ -0.98
TDP1-204ENST00000545686 RAP2CQ9Y3L5 183 aa8.95□□□□□ -0.98
TDP1-204ENST00000545686 RPS6KL1Q9Y6S9 549 aa8.95□□□□□ -0.98
TDP1-204ENST00000545686 PAPPA2Q9BXP8 1791 aa8.95□□□□□ -0.98
TDP1-204ENST00000545686 ARHGAP10A1A4S6 786 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 H0YJX3 145 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 HDAC3O15379 428 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 MFSD11O43934 449 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 PGM3O95394 542 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 PPARGP37231 505 aaPredicted RBP8.94□□□□□ -0.98
TDP1-204ENST00000545686 CLCN3P51790 818 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 USP4Q13107 963 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 LY6KQ17RY6 165 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 ZNF423Q2M1K9 1284 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 DSELQ8IZU8 1212 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.94□□□□□ -0.98
TDP1-204ENST00000545686 MAPK15Q8TD08 544 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 PGBD4Q96DM1 585 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 P2RY11Q96G91 374 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 FAM210AQ96ND0 272 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 IL22Q9GZX6 179 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 MRGBPQ9NV56 204 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 OXSMQ9NWU1 459 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 CLIC5Q9NZA1 410 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 VTI1BQ9UEU0 232 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 ANKRD6Q9Y2G4 727 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 DERAQ9Y315 318 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 GMEB1Q9Y692 573 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 AP4B1Q9Y6B7 739 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 OTOFQ9HC10 1997 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 A0A096LPK6 155 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 GOLGA8QA0A0J9YX86 632 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 PRSS51A0A1B0GVH4 220 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 GOLGA8OA6NCC3 632 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 GOLGA8NF8WBI6 632 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 ZMPSTE24O75844 475 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 GABBR2O75899 941 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 OR6B1O95007 311 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 C22orf31O95567 290 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 GJB1P08034 283 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 ERVK-10P10266 1014 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 GOT1P17174 413 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 TFE3P19532 575 aaPredicted RBP8.94□□□□□ -0.98
TDP1-204ENST00000545686 DNAJB1P25685 340 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 PSMB4P28070 264 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 ACADSBP45954 432 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 THOP1P52888 689 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 BCAT1P54687 386 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 BST2Q10589 180 aaKnown RBP8.94□□□□□ -0.98
TDP1-204ENST00000545686 PEX6Q13608 980 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 CYLC2Q14093 348 aaPredicted RBP8.94□□□□□ -0.98
TDP1-204ENST00000545686 HSDL1Q3SXM5 330 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 SEL1L3Q68CR1 1132 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 NAPRTQ6XQN6 538 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 RBM44Q6ZP01 1051 aaKnown RBP8.94□□□□□ -0.98
TDP1-204ENST00000545686 CMC1Q7Z7K0 106 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 TMEM135Q86UB9 458 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 SNX32Q86XE0 403 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 TMEM130Q8N3G9 435 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 CCDC185Q8N715 623 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 NMD3Q96D46 503 aaKnown RBP8.94□□□□□ -0.98
TDP1-204ENST00000545686 MAML3Q96JK9 1138 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 OR52B2Q96RD2 323 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 LGMNQ99538 433 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 OXCT2Q9BYC2 517 aaPredicted RBP8.94□□□□□ -0.98
TDP1-204ENST00000545686 DRC3Q9H069 523 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 ZCWPW1Q9H0M4 648 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 NMRAL1Q9HBL8 299 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 UBAP1Q9NZ09 502 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 FZD10Q9ULW2 581 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 LZTS1Q9Y250 596 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 RAD54BQ9Y620 910 aa8.94□□□□□ -0.98
TDP1-204ENST00000545686 ERI2A8K979 691 aaKnown RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 AIM2O14862 343 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 BCAS2O75934 225 aaPredicted RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 ARIH2O95376 493 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 FAM58BPP0C7Q3 252 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 SRGAP2BP0DMP2 458 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 IFRD2Q12894 506 aaPredicted RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 PRKAA1Q13131 559 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 TTLL12Q14166 644 aaPredicted RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 PAFAH1B3Q15102 231 aaKnown RBP8.93□□□□□ -0.98
TDP1-204ENST00000545686 TBC1D25Q3MII6 688 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 NADK2Q4G0N4 442 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 ZNF484Q5JVG2 852 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 LIPMQ5VYY2 423 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 FSTL4Q6MZW2 842 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 KLC3Q6P597 504 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 KLHDC10Q6PID8 442 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 ZYG11AQ6WRX3 759 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 STRA8Q7Z7C7 330 aa8.93□□□□□ -0.98
TDP1-204ENST00000545686 ACOT1Q86TX2 421 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms