RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 C14orf80Q86SX3 495 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 XYLT1Q86Y38 959 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 MMAAQ8IVH4 418 aaKnown RBP21.77■■□□□ 1.08
SCARB1-210ENST00000545493 NAXDQ8IW45 347 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 ENOX1Q8TC92 643 aaKnown RBP21.77■■□□□ 1.08
SCARB1-210ENST00000545493 EPS8L1Q8TE68 723 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 PTPRN2Q92932 1015 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 TMEM121BQ9BXQ6 578 aaPredicted RBP21.77■■□□□ 1.08
SCARB1-210ENST00000545493 TM9SF3Q9HD45 589 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 SCML1Q9UN30 329 aa21.77■■□□□ 1.08
SCARB1-210ENST00000545493 FNDC3AQ9Y2H6 1198 aaKnown RBP21.77■■□□□ 1.08
SCARB1-210ENST00000545493 FREM2Q5SZK8 3169 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 TARSL2A2RTX5 802 aaKnown RBP21.76■■□□□ 1.07
SCARB1-210ENST00000545493 C10orf142B7Z368 130 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 FSBPO95073 299 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 ADCY5O95622 1261 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 IGHV4-34P06331 123 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 VAV1P15498 845 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 PSMD8P48556 350 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 SNX16P57768 344 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 NOMO3P69849 1222 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 C5orf22Q49AR2 442 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 C2CD6Q53TS8 623 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 FAM102AQ5T9C2 384 aaPredicted RBP21.76■■□□□ 1.07
SCARB1-210ENST00000545493 STK40Q8N2I9 435 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 NT5C3BQ969T7 300 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 ALG14Q96F25 216 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 FAM129BQ96TA1 746 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 PDCL3Q9H2J4 239 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 FBXL12Q9NXK8 326 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 ARHGEF38Q9NXL2 777 aa21.76■■□□□ 1.07
SCARB1-210ENST00000545493 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.76■■□□□ 1.07
SCARB1-210ENST00000545493 C1QTNF9BB2RNN3 333 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 RNASEH1O60930 286 aaKnown RBP21.75■■□□□ 1.07
SCARB1-210ENST00000545493 CER1O95813 267 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 MMEP08473 750 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 C1QTNF9P0C862 333 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 FLT3P36888 993 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 SCNN1AP37088 669 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 CXCR3P49682 368 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 AFF3P51826 1226 aaKnown RBP21.75■■□□□ 1.07
SCARB1-210ENST00000545493 PLK1P53350 603 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 KRT31Q15323 416 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 TRNP1Q6NT89 227 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 ZNF683Q8IZ20 524 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 AADATQ8N5Z0 425 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 FRS2Q8WU20 508 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 PGAP3Q96FM1 320 aaPredicted RBP21.75■■□□□ 1.07
SCARB1-210ENST00000545493 TBCBQ99426 244 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 SCNM1Q9BWG6 230 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 STK33Q9BYT3 514 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 TKTL2Q9H0I9 626 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 GAREM1Q9H706 876 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 OSGEPQ9NPF4 335 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 RRN3Q9NYV6 651 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 ADAMTS1Q9UHI8 967 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 STAP1Q9ULZ2 295 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 SNX10Q9Y5X0 201 aa21.75■■□□□ 1.07
SCARB1-210ENST00000545493 ZZEF1O43149 2961 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 EPHB6O15197 1021 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 HYAL3O43820 417 aaPredicted RBP21.74■■□□□ 1.07
SCARB1-210ENST00000545493 KRT37O76014 449 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 CNTN5O94779 1100 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 LSM8O95777 96 aaKnown RBP21.74■■□□□ 1.07
SCARB1-210ENST00000545493 CD27P26842 260 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 GRIA4P48058 902 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 CSNK1EP49674 416 aaKnown RBP21.74■■□□□ 1.07
SCARB1-210ENST00000545493 RNASE9P60153 205 aaKnown RBP21.74■■□□□ 1.07
SCARB1-210ENST00000545493 SULT2A1Q06520 285 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 MTA1Q13330 715 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 KIF19Q2TAC6 998 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 HLA-BQ31612 363 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 KIAA0895LQ68EN5 471 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 NCEH1Q6PIU2 408 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 UNQ6494/PRO21346Q6UXR6 183 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 GANCQ8TET4 914 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 SLC20A1Q8WUM9 679 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 C18orf8Q96DM3 657 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 VPS16Q9H269 839 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 NOCTQ9UK39 431 aaKnown RBP21.74■■□□□ 1.07
SCARB1-210ENST00000545493 FZD4Q9ULV1 537 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 NCKAP1Q9Y2A7 1128 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 OR51B4Q9Y5P0 310 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 LAMA5O15230 3695 aa21.74■■□□□ 1.07
SCARB1-210ENST00000545493 CBFA2T3O75081 653 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 RNASEH2AO75792 299 aaKnown RBP21.73■■□□□ 1.07
SCARB1-210ENST00000545493 ZNF883P0CG24 379 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 SLC8A1P32418 973 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 METAP1P53582 386 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 JAM2P57087 298 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 ELAVL3Q14576 367 aaKnown RBP21.73■■□□□ 1.07
SCARB1-210ENST00000545493 ALFQ53S48 1182 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 BRMS1LQ5PSV4 323 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 ARTNQ5T4W7 220 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 IL27RAQ6UWB1 636 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 BNIPLQ7Z465 357 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 ERICH1Q86X53 443 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 NEUROG2Q9H2A3 272 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 EBF2Q9HAK2 575 aa21.73■■□□□ 1.07
SCARB1-210ENST00000545493 TMPRSS4Q9NRS4 437 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms