RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 OAZ1P54368 228 aa6.14□□□□□ -1.43
COPA-206ENST00000545266 RPS13P62277 151 aaKnown RBP6.14□□□□□ -1.43
COPA-206ENST00000545266 RHAGQ02094 409 aa6.14□□□□□ -1.43
COPA-206ENST00000545266 GHRHRQ02643 423 aa6.14□□□□□ -1.43
COPA-206ENST00000545266 PGM5Q15124 567 aa6.14□□□□□ -1.43
COPA-206ENST00000545266 TAF12Q16514 161 aa6.14□□□□□ -1.43
COPA-206ENST00000545266 SUPT20HL1Q3ZLR7 823 aa6.14□□□□□ -1.43
COPA-206ENST00000545266 SLC9C1Q4G0N8 1177 aa6.14□□□□□ -1.43
COPA-206ENST00000545266 LVRNQ6Q4G3 990 aa6.14□□□□□ -1.43
COPA-206ENST00000545266 YTHDF3Q7Z739 585 aaKnown RBP6.14□□□□□ -1.43
COPA-206ENST00000545266 GALNT7Q86SF2 657 aa6.14□□□□□ -1.43
COPA-206ENST00000545266 DDB2Q92466 427 aa6.14□□□□□ -1.43
COPA-206ENST00000545266 COQ8BQ96D53 544 aa6.14□□□□□ -1.43
COPA-206ENST00000545266 SH2D3AQ9BRG2 576 aa6.14□□□□□ -1.43
COPA-206ENST00000545266 THAP1Q9NVV9 213 aa6.14□□□□□ -1.43
COPA-206ENST00000545266 TMEM248Q9NWD8 314 aa6.14□□□□□ -1.43
COPA-206ENST00000545266 HOXC11O43248 304 aaPredicted RBP6.13□□□□□ -1.43
COPA-206ENST00000545266 DHX16O60231 1041 aaKnown RBP6.13□□□□□ -1.43
COPA-206ENST00000545266 PRR35P0CG20 571 aa6.13□□□□□ -1.43
COPA-206ENST00000545266 LYL1P12980 280 aa6.13□□□□□ -1.43
COPA-206ENST00000545266 RPS6KA3P51812 740 aa6.13□□□□□ -1.43
COPA-206ENST00000545266 SRSF1Q07955 248 aaKnown RBP eCLIP6.13□□□□□ -1.43
COPA-206ENST00000545266 SRSF4Q08170 494 aaKnown RBP6.13□□□□□ -1.43
COPA-206ENST00000545266 STIM1Q13586 685 aa6.13□□□□□ -1.43
COPA-206ENST00000545266 PLK5Q496M5 336 aa6.13□□□□□ -1.43
COPA-206ENST00000545266 WDR45BQ5MNZ6 344 aa6.13□□□□□ -1.43
COPA-206ENST00000545266 C10orf76Q5T2E6 689 aa6.13□□□□□ -1.43
COPA-206ENST00000545266 FAM57BQ71RH2 274 aa6.13□□□□□ -1.43
COPA-206ENST00000545266 ZNF575Q86XF7 245 aa6.13□□□□□ -1.43
COPA-206ENST00000545266 C2CD4CQ8TF44 421 aa6.13□□□□□ -1.43
COPA-206ENST00000545266 CLMNQ96JQ2 1002 aa6.13□□□□□ -1.43
COPA-206ENST00000545266 CLPBQ9H078 707 aa6.13□□□□□ -1.43
COPA-206ENST00000545266 GGA3Q9NZ52 723 aa6.13□□□□□ -1.43
COPA-206ENST00000545266 BTBD3Q9Y2F9 522 aa6.13□□□□□ -1.43
COPA-206ENST00000545266 ZNF335Q9H4Z2 1342 aaPredicted RBP6.13□□□□□ -1.43
COPA-206ENST00000545266 RRN3P2A6NIE6 340 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 C17orf100A8MU93 164 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 TLR2O60603 784 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 KELP23276 732 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 MAPK9P45984 424 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 ZBTB16Q05516 673 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 SLC12A1Q13621 1099 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 GXYLT1Q4G148 440 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 DPY19L2P1Q6NXN4 242 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 SLC30A9Q6PML9 568 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 SYNE3Q6ZMZ3 975 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 TMTC1Q8IUR5 882 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 PIGOQ8TEQ8 1089 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 MAELQ96JY0 434 aaKnown RBP6.12□□□□□ -1.43
COPA-206ENST00000545266 ADAD1Q96M93 576 aaKnown RBP6.12□□□□□ -1.43
COPA-206ENST00000545266 TRIM31Q9BZY9 425 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 Q9N2J8 555 aa6.12□□□□□ -1.43
COPA-206ENST00000545266 PAPOLBQ9NRJ5 636 aaKnown RBP6.12□□□□□ -1.43
COPA-206ENST00000545266 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.12□□□□□ -1.43
COPA-206ENST00000545266 AGO2Q9UKV8 859 aaKnown RBP6.12□□□□□ -1.43
COPA-206ENST00000545266 COL3A1P02461 1466 aaPredicted RBP6.11□□□□□ -1.43
COPA-206ENST00000545266 ZNF804BA4D1E1 1349 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 TLX3O43711 291 aaPredicted RBP6.11□□□□□ -1.43
COPA-206ENST00000545266 HLA-DQA2P01906 255 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 LCKP06239 509 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 CYP4B1P13584 511 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 STAT1P42224 750 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.11□□□□□ -1.43
COPA-206ENST00000545266 CCDC142Q17RM4 750 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 ALFQ53S48 1182 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 MORN5Q5VZ52 161 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 ISM2Q6H9L7 571 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 KLBQ86Z14 1044 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 RBM17Q96I25 401 aaKnown RBP6.11□□□□□ -1.43
COPA-206ENST00000545266 POLR3GLQ9BT43 218 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 FRMD8Q9BZ67 464 aaPredicted RBP6.11□□□□□ -1.43
COPA-206ENST00000545266 WASH6PQ9NQA3 447 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 TLR8Q9NR97 1041 aaKnown RBP6.11□□□□□ -1.43
COPA-206ENST00000545266 C9orf78Q9NZ63 289 aaPredicted RBP6.11□□□□□ -1.43
COPA-206ENST00000545266 SLC13A4Q9UKG4 626 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 TNFSF13BQ9Y275 285 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 GDAQ9Y2T3 454 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 AFG3L2Q9Y4W6 797 aa6.11□□□□□ -1.43
COPA-206ENST00000545266 TRBV5-3A0A0A0MS03 114 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 KIR2DS5A0A0G2JLQ3 304 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 FAM90A7PA6NKC0 464 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 FAM90A22PA8MWA6 464 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 FAM90A12PA8MX19 464 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 FAM90A23PA8MXZ1 464 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 KIR2DS3K7RE56 304 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 EYA2O00167 538 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 PRPF4O43172 522 aaKnown RBP eCLIP6.1□□□□□ -1.43
COPA-206ENST00000545266 PYGLP06737 847 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 TYK2P29597 1187 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 GJC1P36383 396 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 ARHGAP25P42331 645 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 C10orf25Q5T742 122 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 AADACL2Q6P093 401 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 BRSK2Q8IWQ3 736 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 ANKRD44Q8N8A2 993 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 IP6K1Q92551 441 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 KCNJ9Q92806 393 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 KAT2AQ92830 837 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 RNFT2Q96EX2 444 aa6.1□□□□□ -1.43
COPA-206ENST00000545266 IPO11Q9UI26 975 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms