RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 CASC3O15234 703 aaKnown RBP9.72□□□□□ -0.85
CHD4-212ENST00000545083 PLRG1O43660 514 aaKnown RBP9.72□□□□□ -0.85
CHD4-212ENST00000545083 ACSL4O60488 711 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 MAGEC1O60732 1142 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 PIAS2O75928 621 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 IGLV3-27P01718 113 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 GP1BAP07359 652 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 THEGLP0DJG4 465 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 TGM2P21980 687 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 GCLMP48507 274 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 RAD23BP54727 409 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 AMPD3Q01432 767 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 PPP3CAQ08209 521 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 ADIGQ0VDE8 80 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 KCNMA1Q12791 1236 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 STAT4Q14765 748 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 ZSCAN23Q3MJ62 389 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 ARL13BQ3SXY8 428 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 ARHGAP17Q68EM7 881 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 TRIM69Q86WT6 500 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 APCDD1Q8J025 514 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 CARNMT1Q8N4J0 409 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 ANKRD52Q8NB46 1076 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 TMEM145Q8NBT3 493 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 KIAA0895Q8NCT3 520 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 GOLGA5Q8TBA6 731 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 KLHDC7BQ96G42 594 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 KCTD10Q9H3F6 313 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 STARD5Q9NSY2 213 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 KLHL11Q9NVR0 708 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 ANKMY1Q9P2S6 941 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 TJP2Q9UDY2 1190 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.72□□□□□ -0.85
CHD4-212ENST00000545083 ENTPD2Q9Y5L3 495 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 KIF26BQ2KJY2 2108 aa9.71□□□□□ -0.85
CHD4-212ENST00000545083 PRAMEF26H0Y7S4 382 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 K7ESM1 405 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 XPO1O14980 1071 aaKnown RBP9.71□□□□□ -0.86
CHD4-212ENST00000545083 GABBR2O75899 941 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 NEBLO76041 1014 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 NR3C1P04150 777 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 SRPRAP08240 638 aaKnown RBP9.71□□□□□ -0.86
CHD4-212ENST00000545083 PRLRP16471 622 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 RBMS1P29558 406 aaKnown RBP9.71□□□□□ -0.86
CHD4-212ENST00000545083 ECT2LQ008S8 904 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 CNTN1Q12860 1018 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 STK4Q13043 487 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 SRSF6Q13247 344 aaKnown RBP9.71□□□□□ -0.86
CHD4-212ENST00000545083 CUL4BQ13620 913 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 ELAVL3Q14576 367 aaKnown RBP9.71□□□□□ -0.86
CHD4-212ENST00000545083 GOLGA7BQ2TAP0 167 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 HS1BP3Q53T59 392 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 ZNF542PQ5EBM4 170 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 AGBL4Q5VU57 503 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 CEP135Q66GS9 1140 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 MSANTD2Q6P1R3 559 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 SHC4Q6S5L8 630 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 CFAP52Q8N1V2 620 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 ZNF557Q8N988 423 aaPredicted RBP9.71□□□□□ -0.86
CHD4-212ENST00000545083 HJURPQ8NCD3 748 aaPredicted RBP9.71□□□□□ -0.86
CHD4-212ENST00000545083 OR13H1Q8NG92 308 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 IFI44Q8TCB0 444 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 MAPK15Q8TD08 544 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 TMEM174Q8WUU8 243 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 SEMA4DQ92854 862 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 KLK6Q92876 244 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 EXTL1Q92935 676 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 ARRDC3Q96B67 414 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 NOX5Q96PH1 765 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 IRX2Q9BZI1 471 aaPredicted RBP9.71□□□□□ -0.86
CHD4-212ENST00000545083 IMPG2Q9BZV3 1241 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 ABCG4Q9H172 646 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 NUCKS1Q9H1E3 243 aaKnown RBP9.71□□□□□ -0.86
CHD4-212ENST00000545083 KDM4CQ9H3R0 1056 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 FZD3Q9NPG1 666 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 CISHQ9NSE2 258 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 ABCC13Q9NSE7 274 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 PCDHGA8Q9Y5G5 932 aa9.71□□□□□ -0.86
CHD4-212ENST00000545083 TDRD6O60522 2096 aaKnown RBP9.71□□□□□ -0.86
CHD4-212ENST00000545083 PVALEFA0A1B0GWK0 134 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 SLC31A1O15431 190 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 IRAK2O43187 625 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 SLC7A4O43246 635 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 SUV39H1O43463 412 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 KLRC4O43908 158 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 NTRK1P04629 796 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 NUDT1P36639 197 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 SLC11A2P49281 568 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 NASPP49321 788 aaPredicted RBP9.7□□□□□ -0.86
CHD4-212ENST00000545083 VAMP7P51809 220 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 PDX1P52945 283 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 TBX4P57082 545 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 DAOAP59103 153 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 TAS2R38P59533 333 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 CDH18Q13634 790 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 SETMARQ53H47 684 aaPredicted RBP9.7□□□□□ -0.86
CHD4-212ENST00000545083 DCAF6Q58WW2 860 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 MS4A13Q5J8X5 152 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 NUGGCQ68CJ6 796 aa9.7□□□□□ -0.86
CHD4-212ENST00000545083 GUSBP11Q6P575 273 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms