RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 PTP4A2Q12974 167 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 CLEC16AQ2KHT3 1053 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 TTC31Q49AM3 519 aaPredicted RBP17.43■□□□□ 0.38
HOXD8-204ENST00000544999 PHF13Q86YI8 300 aaPredicted RBP17.43■□□□□ 0.38
HOXD8-204ENST00000544999 ZNF683Q8IZ20 524 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 RGL4Q8IZJ4 473 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 SPDYE1Q8NFV5 336 aaPredicted RBP17.43■□□□□ 0.38
HOXD8-204ENST00000544999 C1orf74Q96LT6 269 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 HAPLN3Q96S86 360 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 AGPAT1Q99943 283 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 PCED1AQ9H1Q7 454 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 RSPH9Q9H1X1 276 aaPredicted RBP17.43■□□□□ 0.38
HOXD8-204ENST00000544999 MTG2Q9H4K7 406 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 SUSD2Q9UGT4 822 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 MYO6Q9UM54 1294 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 SCML1Q9UN30 329 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 SLC6A14Q9UN76 642 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 GON4LQ3T8J9 2241 aa17.43■□□□□ 0.38
HOXD8-204ENST00000544999 C4orf47A7E2U8 309 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 MEI4A8MW99 385 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 TTC34A8MYJ7 566 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 CDX4O14627 284 aaPredicted RBP17.42■□□□□ 0.38
HOXD8-204ENST00000544999 RNASEH1O60930 286 aaKnown RBP17.42■□□□□ 0.38
HOXD8-204ENST00000544999 CFIP05156 583 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 CALB1P05937 261 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 SERPINF2P08697 491 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 NNMTP40261 264 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 VASPP50552 380 aaPredicted RBP17.42■□□□□ 0.38
HOXD8-204ENST00000544999 IQCB1Q15051 598 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 C9orf64Q5T6V5 341 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 DAB2IPQ5VWQ8 1189 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 LRRC31Q6UY01 552 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 EMC1Q8N766 993 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 RXFP2Q8WXD0 754 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 DNASE2BQ8WZ79 361 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 ALG14Q96F25 216 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 RPL10LQ96L21 214 aaKnown RBP17.42■□□□□ 0.38
HOXD8-204ENST00000544999 CAPN10Q9HC96 672 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 SEPT11Q9NVA2 429 aaKnown RBP17.42■□□□□ 0.38
HOXD8-204ENST00000544999 ADAM22Q9P0K1 906 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 SLCO3A1Q9UIG8 710 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 TBC1D30Q9Y2I9 924 aa17.42■□□□□ 0.38
HOXD8-204ENST00000544999 NYNRINQ9P2P1 1898 aaKnown RBP17.41■□□□□ 0.38
HOXD8-204ENST00000544999 IGLV3-10A0A075B6K4 115 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 C2CD4BA6NLJ0 364 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 DRGXA6NNA5 263 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 METTL12A8MUP2 240 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 CNTN5O94779 1100 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 GNSP15586 552 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 ENGP17813 658 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 PTMSP20962 102 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 SDC4P31431 198 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 STK19P49842 368 aaPredicted RBP17.41■□□□□ 0.38
HOXD8-204ENST00000544999 ATP11AP98196 1134 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 ALFQ53S48 1182 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 PPM1JQ5JR12 505 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 DCAF12L1Q5VU92 463 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 PHLDB2Q86SQ0 1253 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 FAM124AQ86V42 546 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 FAM131BQ86XD5 332 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 OR52K2Q8NGK3 314 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 BAP1Q92560 729 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 FEM1AQ9BSK4 669 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 SELENOOQ9BVL4 669 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 BTBD1Q9H0C5 482 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 PABPC3Q9H361 631 aaKnown RBP17.41■□□□□ 0.38
HOXD8-204ENST00000544999 OR51B4Q9Y5P0 310 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 SNX10Q9Y5X0 201 aa17.41■□□□□ 0.38
HOXD8-204ENST00000544999 PCDH15Q96QU1 1955 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 A0A1B0GTH6 734 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 A0A1W2PQC6 194 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 SYCE3A1L190 88 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 E9PAM4 449 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 RHOCP08134 193 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 KRT3P12035 628 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 MAOBP27338 520 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 PTPN9P43378 593 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 GFPT1Q06210 699 aaPredicted RBP17.4■□□□□ 0.38
HOXD8-204ENST00000544999 SFSWAPQ12872 951 aaKnown RBP17.4■□□□□ 0.38
HOXD8-204ENST00000544999 C15orf59Q2T9L4 293 aaPredicted RBP17.4■□□□□ 0.38
HOXD8-204ENST00000544999 CCDC14Q49A88 953 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 USP30Q70CQ3 517 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 MON1BQ7L1V2 547 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 STRADAQ7RTN6 431 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 SETD3Q86TU7 594 aaPredicted RBP17.4■□□□□ 0.38
HOXD8-204ENST00000544999 C3orf20Q8ND61 904 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 JOSD2Q8TAC2 188 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 PTPRN2Q92932 1015 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 SGK2Q9HBY8 427 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 TMPRSS4Q9NRS4 437 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 SLC25A13Q9UJS0 675 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 NCKAP1Q9Y2A7 1128 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 DOCK4Q8N1I0 1966 aa17.4■□□□□ 0.38
HOXD8-204ENST00000544999 HAX1O00165 279 aa17.39■□□□□ 0.37
HOXD8-204ENST00000544999 GJB6O95452 261 aa17.39■□□□□ 0.37
HOXD8-204ENST00000544999 SYPP08247 313 aa17.39■□□□□ 0.37
HOXD8-204ENST00000544999 ACSL1P33121 698 aa17.39■□□□□ 0.37
HOXD8-204ENST00000544999 CST6Q15828 149 aa17.39■□□□□ 0.37
HOXD8-204ENST00000544999 CDO1Q16878 200 aa17.39■□□□□ 0.37
HOXD8-204ENST00000544999 ARL13BQ3SXY8 428 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms