RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 NR1I3Q14994 352 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 ASIC2Q16515 512 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 DUOXA1Q1HG43 343 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 ZSCAN23Q3MJ62 389 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 FSCBQ5H9T9 825 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 C6orf118Q5T5N4 469 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 SFMBT2Q5VUG0 894 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 OTUD1Q5VV17 481 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-216ENST00000544989 PEAR1Q5VY43 1037 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-216ENST00000544989 ZNF776Q68DI1 518 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-216ENST00000544989 IL31Q6EBC2 164 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 DNAJC24Q6P3W2 148 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 ZNF783Q6ZMS7 281 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 MON1BQ7L1V2 547 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 IRF2BP2Q7Z5L9 587 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 BAP1Q92560 729 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 PIGKQ92643 395 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 MYEOVQ96EZ4 313 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 ZNF419Q96HQ0 510 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-216ENST00000544989 CFAP57Q96MR6 1250 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 PCDHB18PQ96TA0 734 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 C2orf49Q9BVC5 232 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-216ENST00000544989 PRSS16Q9NQE7 514 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 WSB2Q9NYS7 404 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-216ENST00000544989 AIPL1Q9NZN9 384 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 SLC25A13Q9UJS0 675 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 INTS6Q9UL03 887 aaKnown RBP12.16□□□□□ -0.46
HDAC4-216ENST00000544989 TBC1D30Q9Y2I9 924 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 BZW2Q9Y6E2 419 aaKnown RBP12.16□□□□□ -0.46
HDAC4-216ENST00000544989 FRYQ5TBA9 3013 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 ZFYVE26Q68DK2 2539 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 IGLV3-10A0A075B6K4 115 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 A0A1W2PQJ5 194 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 LRRC53A6NM62 1247 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 DRGXA6NNA5 263 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 GZMAP12544 262 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 HLA-EP13747 358 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 ETFBP38117 255 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 PRKCIP41743 596 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 AIF1P55008 147 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 UBASH3AP57075 661 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 ATP11AP98196 1134 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 FANCCQ00597 558 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 PTP4A2Q12974 167 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 C2CD6Q53TS8 623 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 ACAD10Q6JQN1 1059 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 CXorf57Q6NSI4 855 aaKnown RBP12.15□□□□□ -0.46
HDAC4-216ENST00000544989 USP30Q70CQ3 517 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 DSG4Q86SJ6 1040 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 LUZP1Q86V48 1076 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 VPS36Q86VN1 386 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 RXFP2Q8WXD0 754 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 CENPIQ92674 756 aaPredicted RBP12.15□□□□□ -0.46
HDAC4-216ENST00000544989 SYN2Q92777 582 aaPredicted RBP12.15□□□□□ -0.46
HDAC4-216ENST00000544989 IGSF8Q969P0 613 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 TRIM11Q96F44 468 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 TOE1Q96GM8 510 aaKnown RBP12.15□□□□□ -0.46
HDAC4-216ENST00000544989 FEM1AQ9BSK4 669 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 MUC3BQ9H195 1237 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 RSPH9Q9H1X1 276 aaPredicted RBP12.15□□□□□ -0.46
HDAC4-216ENST00000544989 PPARGC1AQ9UBK2 798 aaKnown RBP12.15□□□□□ -0.46
HDAC4-216ENST00000544989 VPS28Q9UK41 221 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 PILRBQ9UKJ0 227 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 TPX2Q9ULW0 747 aaKnown RBP12.15□□□□□ -0.46
HDAC4-216ENST00000544989 NCKAP1Q9Y2A7 1128 aa12.15□□□□□ -0.46
HDAC4-216ENST00000544989 GON4LQ3T8J9 2241 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 CXorf51AA0A1B0GTR3 108 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 MEI4A8MW99 385 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 E9PAM4 449 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 ADH1BP00325 375 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 RHOCP08134 193 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 TFE3P19532 575 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-216ENST00000544989 GPD1P21695 349 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 ADRA1BP35368 520 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 PTGER3P43115 390 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 ZNF143P52747 638 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-216ENST00000544989 KLHL30Q0D2K2 578 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 ELAVL3Q14576 367 aaKnown RBP12.14□□□□□ -0.47
HDAC4-216ENST00000544989 SF3A2Q15428 464 aaKnown RBP12.14□□□□□ -0.47
HDAC4-216ENST00000544989 CCDC14Q49A88 953 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 TRIM61Q5EBN2 209 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 DAB2IPQ5VWQ8 1189 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 DCUN1D2Q6PH85 259 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 SLC23A3Q6PIS1 610 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 CIR1Q86X95 450 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-216ENST00000544989 FAM131BQ86XD5 332 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 MCOLN2Q8IZK6 566 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 EMC1Q8N766 993 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 FAM172AQ8WUF8 416 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 NTAN1Q96AB6 310 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 MYO19Q96H55 970 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 MRGPRX3Q96LB0 322 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 CCDC114Q96M63 670 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 HSPA12BQ96MM6 686 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 NAP1L5Q96NT1 182 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-216ENST00000544989 EDEM2Q9BV94 578 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 ADAM33Q9BZ11 813 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 ZYG11BQ9C0D3 744 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 BTBD1Q9H0C5 482 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 OSBPL2Q9H1P3 480 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms