RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 POPDC2Q9HBU9 364 aa12.91□□□□□ -0.34
ACTN1-206ENST00000544964 DNAAF2Q9NVR5 837 aaKnown RBP12.91□□□□□ -0.34
ACTN1-206ENST00000544964 CNOT8Q9UFF9 292 aaKnown RBP12.91□□□□□ -0.34
ACTN1-206ENST00000544964 SFMBT1Q9UHJ3 866 aa12.91□□□□□ -0.34
ACTN1-206ENST00000544964 ACACAQ13085 2346 aa12.91□□□□□ -0.34
ACTN1-206ENST00000544964 LAMA5O15230 3695 aa12.91□□□□□ -0.34
ACTN1-206ENST00000544964 TCRBV5S1A1TA0A578 114 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 SLC12A8A0AV02 714 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 NPC1O15118 1278 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 ZBTB24O43167 697 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-206ENST00000544964 HYAL3O43820 417 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-206ENST00000544964 DAB1O75553 588 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 IGLV3-19P01714 112 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 GLI1P08151 1106 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 KRT3P12035 628 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 CD6P30203 668 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 CYLC1P35663 651 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-206ENST00000544964 FLT3P36888 993 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 SCNN1AP37088 669 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 ATXN3P54252 364 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-206ENST00000544964 GALCP54803 685 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 PITX1P78337 314 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-206ENST00000544964 STARD3Q14849 445 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 DCAF6Q58WW2 860 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 TRNP1Q6NT89 227 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 CCDC170Q8IYT3 715 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 C3orf20Q8ND61 904 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 ADAM32Q8TC27 787 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 DQX1Q8TE96 717 aaKnown RBP12.9□□□□□ -0.34
ACTN1-206ENST00000544964 ARHGEF26Q96DR7 871 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 TOE1Q96GM8 510 aaKnown RBP12.9□□□□□ -0.34
ACTN1-206ENST00000544964 PDLIM2Q96JY6 352 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 SLC2A13Q96QE2 648 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 SLC32A1Q9H598 525 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 PRDM16Q9HAZ2 1276 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 OLA1Q9NTK5 396 aaKnown RBP12.9□□□□□ -0.34
ACTN1-206ENST00000544964 ELOVL2Q9NXB9 296 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 STOML2Q9UJZ1 356 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 TMEM59LQ9UK28 342 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 ZMIZ1Q9ULJ6 1067 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 EPN1Q9Y6I3 576 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-206ENST00000544964 TMEM131Q92545 1883 aa12.9□□□□□ -0.34
ACTN1-206ENST00000544964 SYNJ2BP-COX16A0A087WUM0 186 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 SIGLEC16A6NMB1 481 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 MSI1O43347 362 aaKnown RBP12.89□□□□□ -0.35
ACTN1-206ENST00000544964 OPHN1O60890 802 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 NDUFS2O75306 463 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 NDUFA10O95299 355 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 PTMAP06454 111 aaKnown RBP12.89□□□□□ -0.35
ACTN1-206ENST00000544964 H2AFZP0C0S5 128 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 MYBL1P10243 752 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 C7P10643 843 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 MAOBP27338 520 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 HLA-FP30511 346 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 RFC1P35251 1148 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-206ENST00000544964 TPMTP51580 245 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 GSCP56915 257 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-206ENST00000544964 SIM1P81133 766 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-206ENST00000544964 GRIK2Q13002 908 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 PLEKHG6Q3KR16 790 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 PLEKHA7Q6IQ23 1121 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 H2AFVQ71UI9 128 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 CACUL1Q86Y37 369 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 LRRC8AQ8IWT6 810 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 HDDC3Q8N4P3 179 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 DNASE2BQ8WZ79 361 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 FOXJ1Q92949 421 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 TRIM11Q96F44 468 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 MCEEQ96PE7 176 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 SLC2A11Q9BYW1 496 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 WSB2Q9NYS7 404 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-206ENST00000544964 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.89□□□□□ -0.35
ACTN1-206ENST00000544964 COX16Q9P0S2 106 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 RALYQ9UKM9 306 aaKnown RBP12.89□□□□□ -0.35
ACTN1-206ENST00000544964 KLK13Q9UKR3 277 aa12.89□□□□□ -0.35
ACTN1-206ENST00000544964 PLXNB3Q9ULL4 1909 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 ANKRD62A6NC57 917 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 EIF3CLB5ME19 914 aaKnown RBP12.88□□□□□ -0.35
ACTN1-206ENST00000544964 LCA5LO95447 670 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 CYBBP04839 570 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 TFE3P19532 575 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-206ENST00000544964 NOS2P35228 1153 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 MATKP42679 507 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 MAGEA1P43355 309 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 SULT1E1P49888 294 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 SGSHP51688 502 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 RPL7AP62424 266 aaKnown RBP12.88□□□□□ -0.35
ACTN1-206ENST00000544964 MAMLD1Q13495 774 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 SPA17Q15506 151 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 SYCP2LQ5T4T6 812 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 MSANTD2Q6P1R3 559 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 DCUN1D2Q6PH85 259 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 BEND5Q7L4P6 421 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 TAC4Q86UU9 113 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 TMPRSS6Q8IU80 811 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 RGL4Q8IZJ4 473 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 ZCCHC9Q8N567 271 aaKnown RBP12.88□□□□□ -0.35
ACTN1-206ENST00000544964 ACRBPQ8NEB7 543 aa12.88□□□□□ -0.35
ACTN1-206ENST00000544964 DDI1Q8WTU0 396 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms