RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 PTPN9P43378 593 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 UBAP2LQ14157 1087 aaKnown RBP5.91□□□□□ -1.46
VPS50-220ENST00000544910 GJC2Q5T442 439 aaPredicted RBP5.91□□□□□ -1.46
VPS50-220ENST00000544910 PMF1Q6P1K2 205 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 GLB1LQ6UWU2 654 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 PACS1Q6VY07 963 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 MOB2Q70IA6 237 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 CHSY1Q86X52 802 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 DEFB107AQ8IZN7 70 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 C10orf82Q8WW14 230 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 C7orf26Q96N11 449 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 CSPG4P5Q96PW8 444 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 IL22Q9GZX6 179 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 DPEP3Q9H4B8 488 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 TCF7L2Q9NQB0 619 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 ARL8BQ9NVJ2 186 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 BLOC1S6Q9UL45 172 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 ACOT9Q9Y305 439 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 DTNAQ9Y4J8 743 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 AP4S1Q9Y587 144 aa5.91□□□□□ -1.46
VPS50-220ENST00000544910 SLC15A5A6NIM6 579 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 TRIM13O60858 407 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 EGFRP00533 1210 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 BPGMP07738 259 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 ITGA2BP08514 1039 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 IL10P22301 178 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 OR1G1P47890 313 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 FCGRTP55899 365 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 SFSWAPQ12872 951 aaKnown RBP5.9□□□□□ -1.46
VPS50-220ENST00000544910 PRKAA1Q13131 559 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 OASLQ15646 514 aaKnown RBP5.9□□□□□ -1.46
VPS50-220ENST00000544910 C10orf120Q5SQS8 335 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 TXNRD3NBQ6F5E7 133 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 PIGZQ86VD9 579 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 HORMAD1Q86X24 394 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 TMEM192Q8IY95 271 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 CCDC185Q8N715 623 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 HASPINQ8TF76 798 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 SEPT8Q92599 483 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 PCYT2Q99447 389 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 LGMNQ99538 433 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 B3GNT5Q9BYG0 378 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 NXF3Q9H4D5 531 aaKnown RBP5.9□□□□□ -1.46
VPS50-220ENST00000544910 SARS2Q9NP81 518 aaKnown RBP5.9□□□□□ -1.46
VPS50-220ENST00000544910 DMAP1Q9NPF5 467 aaPredicted RBP5.9□□□□□ -1.46
VPS50-220ENST00000544910 PDLIM7Q9NR12 457 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 ARHGEF3Q9NR81 526 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 CDH9Q9ULB4 789 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 LOXHD1Q8IVV2 1947 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 MFSD11O43934 449 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 MLNP12872 115 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 CYP3A5P20815 502 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 CCR1P32246 355 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 MLH1P40692 756 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 PTDSS1P48651 473 aaKnown RBP5.9□□□□□ -1.46
VPS50-220ENST00000544910 CRYBB1P53674 252 aaPredicted RBP5.9□□□□□ -1.46
VPS50-220ENST00000544910 MRPS6P82932 125 aaKnown RBP5.9□□□□□ -1.46
VPS50-220ENST00000544910 KRT72Q14CN4 511 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 MYLK4Q86YV6 388 aaPredicted RBP5.9□□□□□ -1.46
VPS50-220ENST00000544910 SLC22A9Q8IVM8 553 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 L3MBTL3Q96JM7 780 aaPredicted RBP5.9□□□□□ -1.46
VPS50-220ENST00000544910 SENP8Q96LD8 212 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 HAPLN2Q9GZV7 340 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 NMRAL1Q9HBL8 299 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 FZD10Q9ULW2 581 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 LZTS1Q9Y250 596 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 IPPQ9Y573 584 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 LRRC37AA6NMS7 1700 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 LTBP3Q9NS15 1303 aa5.9□□□□□ -1.46
VPS50-220ENST00000544910 TCRBV7S3A2A0A539 114 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 FGF10O15520 208 aaPredicted RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 RGS20O76081 388 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 B3GAT3O94766 335 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 RBP1P09455 135 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 TCN1P20061 433 aaPredicted RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 HK2P52789 917 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 GPX6P59796 221 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 MRPL28Q13084 256 aaKnown RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 KCNJ11Q14654 390 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 POU6F1Q14863 301 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 FSCN1Q16658 493 aaKnown RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 IL31Q6EBC2 164 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 DPY19L2P1Q6NXN4 242 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 TAF2Q6P1X5 1199 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 CCDC80Q76M96 950 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 LZTR1Q8N653 840 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 PCYOX1LQ8NBM8 494 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 RDH11Q8TC12 318 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 PIWIL2Q8TC59 973 aaKnown RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 SGF29Q96ES7 293 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 UROC1Q96N76 676 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 SPON2Q9BUD6 331 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 CINPQ9BW66 212 aaPredicted RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 EFCAB1Q9HAE3 211 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 CNGB3Q9NQW8 809 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 DNAJC28Q9NX36 388 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 HBS1LQ9Y450 684 aaKnown RBP5.9□□□□□ -1.47
VPS50-220ENST00000544910 KIF13BQ9NQT8 1826 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 KCNK1O00180 336 aa5.9□□□□□ -1.47
VPS50-220ENST00000544910 CLDN5O00501 218 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms