RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 MTSS1O43312 755 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 MAPKAPK2P49137 400 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 ANKRD20A2Q5SQ80 823 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 FAM182AQ5T1J6 154 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 ANKRD20A1Q5TYW2 823 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 ANKRD20A3Q5VUR7 823 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 LRRC49Q8IUZ0 686 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 PPIL6Q8IXY8 311 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 CFAP52Q8N1V2 620 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 ATPAF2Q8N5M1 289 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 VN1R2Q8NFZ6 395 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 CPT1BQ92523 772 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 PPP2R3CQ969Q6 453 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 SEPT10Q9P0V9 454 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 ARHGAP26Q9UNA1 814 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 SHOC2Q9UQ13 582 aa31.21■■■□□ 2.59
CCM2-219ENST00000544363 ZFP37Q9Y6Q3 630 aaPredicted RBP31.21■■■□□ 2.59
CCM2-219ENST00000544363 ZNF197O14709 1029 aa31.2■■■□□ 2.59
CCM2-219ENST00000544363 CCNCP24863 283 aa31.2■■■□□ 2.59
CCM2-219ENST00000544363 HSPA9P38646 679 aaKnown RBP31.2■■■□□ 2.59
CCM2-219ENST00000544363 WASHC5Q12768 1159 aa31.2■■■□□ 2.59
CCM2-219ENST00000544363 TMC3Q7Z5M5 1100 aa31.2■■■□□ 2.59
CCM2-219ENST00000544363 CMTM8Q8IZV2 173 aa31.2■■■□□ 2.59
CCM2-219ENST00000544363 TAB3Q8N5C8 712 aaPredicted RBP31.2■■■□□ 2.59
CCM2-219ENST00000544363 PRICKLE1Q96MT3 831 aaPredicted RBP31.2■■■□□ 2.59
CCM2-219ENST00000544363 PIDD1Q9HB75 910 aa31.2■■■□□ 2.59
CCM2-219ENST00000544363 CFAP97Q9P2B7 532 aa31.2■■■□□ 2.59
CCM2-219ENST00000544363 MAP2K7O14733 419 aa31.2■■■□□ 2.58
CCM2-219ENST00000544363 BASP1P80723 227 aaKnown RBP31.2■■■□□ 2.58
CCM2-219ENST00000544363 DHX9Q08211 1270 aaKnown RBP31.2■■■□□ 2.58
CCM2-219ENST00000544363 ARHGEF18Q6ZSZ5 1173 aa31.2■■■□□ 2.58
CCM2-219ENST00000544363 HTR3DQ70Z44 454 aa31.2■■■□□ 2.58
CCM2-219ENST00000544363 HOOK3Q86VS8 718 aa31.2■■■□□ 2.58
CCM2-219ENST00000544363 C12orf76Q8N812 135 aaPredicted RBP31.2■■■□□ 2.58
CCM2-219ENST00000544363 SMG7Q92540 1137 aaKnown RBP31.2■■■□□ 2.58
CCM2-219ENST00000544363 TSPYL1Q9H0U9 437 aa31.2■■■□□ 2.58
CCM2-219ENST00000544363 SFXN1Q9H9B4 322 aa31.2■■■□□ 2.58
CCM2-219ENST00000544363 RAB6BQ9NRW1 208 aa31.2■■■□□ 2.58
CCM2-219ENST00000544363 ZNF510Q9Y2H8 683 aa31.2■■■□□ 2.58
CCM2-219ENST00000544363 SH3BP1Q9Y3L3 701 aa31.2■■■□□ 2.58
CCM2-219ENST00000544363 KCNK1O00180 336 aa31.19■■■□□ 2.58
CCM2-219ENST00000544363 TRDMT1O14717 391 aaKnown RBP31.19■■■□□ 2.58
CCM2-219ENST00000544363 OPHN1O60890 802 aa31.19■■■□□ 2.58
CCM2-219ENST00000544363 SASH3O75995 380 aa31.19■■■□□ 2.58
CCM2-219ENST00000544363 AVPR1AP37288 418 aa31.19■■■□□ 2.58
CCM2-219ENST00000544363 PAPOLAP51003 745 aaKnown RBP31.19■■■□□ 2.58
CCM2-219ENST00000544363 CDH4P55283 916 aa31.19■■■□□ 2.58
CCM2-219ENST00000544363 ARHGAP36Q6ZRI8 547 aa31.19■■■□□ 2.58
CCM2-219ENST00000544363 NAT8LQ8N9F0 302 aa31.19■■■□□ 2.58
CCM2-219ENST00000544363 PRCCQ92733 491 aaPredicted RBP31.19■■■□□ 2.58
CCM2-219ENST00000544363 TXLNGYQ9BZA5 131 aa31.19■■■□□ 2.58
CCM2-219ENST00000544363 FOXP3Q9BZS1 431 aa31.19■■■□□ 2.58
CCM2-219ENST00000544363 ZMYM5Q9UJ78 669 aa31.19■■■□□ 2.58
CCM2-219ENST00000544363 LAMA3Q16787 3333 aa31.18■■■□□ 2.58
CCM2-219ENST00000544363 SMAPO00193 183 aa31.18■■■□□ 2.58
CCM2-219ENST00000544363 LEFTY2O00292 366 aa31.18■■■□□ 2.58
CCM2-219ENST00000544363 MAFKO60675 156 aa31.18■■■□□ 2.58
CCM2-219ENST00000544363 PPFIA2O75334 1257 aa31.18■■■□□ 2.58
CCM2-219ENST00000544363 PTPN3P26045 913 aa31.18■■■□□ 2.58
CCM2-219ENST00000544363 OR1E1P30953 314 aa31.18■■■□□ 2.58
CCM2-219ENST00000544363 RPS24P62847 133 aaKnown RBP31.18■■■□□ 2.58
CCM2-219ENST00000544363 FAM217AQ8IXS0 508 aa31.18■■■□□ 2.58
CCM2-219ENST00000544363 ZCCHC9Q8N567 271 aaKnown RBP31.18■■■□□ 2.58
CCM2-219ENST00000544363 DZANK1Q9NVP4 752 aa31.18■■■□□ 2.58
CCM2-219ENST00000544363 ARHGAP42A6NI28 874 aa31.17■■■□□ 2.58
CCM2-219ENST00000544363 CHKAP35790 457 aa31.17■■■□□ 2.58
CCM2-219ENST00000544363 ZNF567Q8N184 647 aa31.17■■■□□ 2.58
CCM2-219ENST00000544363 TSEN2Q8NCE0 465 aaKnown RBP31.17■■■□□ 2.58
CCM2-219ENST00000544363 PRO3102Q9H379 93 aa31.17■■■□□ 2.58
CCM2-219ENST00000544363 RASA4BC9J798 803 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 RASA4O43374 803 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 TSPAN3O60637 253 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 RAMP2O60895 175 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 CLDN11O75508 207 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 METTL18O95568 372 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 SGSHP51688 502 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 YBEYP58557 167 aaPredicted RBP31.16■■■□□ 2.58
CCM2-219ENST00000544363 SLMAPQ14BN4 828 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 TTC39BQ5VTQ0 682 aaPredicted RBP31.16■■■□□ 2.58
CCM2-219ENST00000544363 ANKRD22Q5VYY1 191 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 TMC5Q6UXY8 1006 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 CHST9Q7L1S5 443 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 HMCESQ96FZ2 354 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 VAT1Q99536 393 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 CEP41Q9BYV8 373 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 SMG9Q9H0W8 520 aaKnown RBP31.16■■■□□ 2.58
CCM2-219ENST00000544363 IGFLR1Q9H665 355 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 ETNK1Q9HBU6 452 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 SCAMP3O14828 347 aaKnown RBP31.16■■■□□ 2.58
CCM2-219ENST00000544363 CHADO15335 359 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 KCNJ11Q14654 390 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 PARP15Q460N3 678 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 TIGD7Q6NT04 549 aaPredicted RBP31.16■■■□□ 2.58
CCM2-219ENST00000544363 TTC16Q8NEE8 873 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 SH3RF2Q8TEC5 729 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 NSUN3Q9H649 340 aaKnown RBP31.16■■■□□ 2.58
CCM2-219ENST00000544363 VIPAS39Q9H9C1 493 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 IPO11Q9UI26 975 aaKnown RBP31.16■■■□□ 2.58
CCM2-219ENST00000544363 ATP8A1Q9Y2Q0 1164 aa31.16■■■□□ 2.58
CCM2-219ENST00000544363 MRPS23Q9Y3D9 190 aaKnown RBP31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms