RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 MPP7Q5T2T1 576 aa12.59□□□□□ -0.39
ITM2C-209ENST00000543957 RBM44Q6ZP01 1051 aaKnown RBP12.59□□□□□ -0.39
ITM2C-209ENST00000543957 STK40Q8N2I9 435 aa12.59□□□□□ -0.39
ITM2C-209ENST00000543957 ZNF557Q8N988 423 aaPredicted RBP12.59□□□□□ -0.39
ITM2C-209ENST00000543957 ZNF507Q8TCN5 953 aa12.59□□□□□ -0.39
ITM2C-209ENST00000543957 ARRDC3Q96B67 414 aa12.59□□□□□ -0.39
ITM2C-209ENST00000543957 DUSP23Q9BVJ7 150 aa12.59□□□□□ -0.39
ITM2C-209ENST00000543957 NT5C1AQ9BXI3 368 aa12.59□□□□□ -0.39
ITM2C-209ENST00000543957 SLC25A18Q9H1K4 315 aa12.59□□□□□ -0.39
ITM2C-209ENST00000543957 KDM4CQ9H3R0 1056 aa12.59□□□□□ -0.39
ITM2C-209ENST00000543957 CAAP1Q9H8G2 361 aa12.59□□□□□ -0.39
ITM2C-209ENST00000543957 KBTBD4Q9NVX7 518 aa12.59□□□□□ -0.39
ITM2C-209ENST00000543957 HBS1LQ9Y450 684 aaKnown RBP12.59□□□□□ -0.39
ITM2C-209ENST00000543957 NBPF19A0A087WUL8 3843 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 CPED1A4D0V7 1026 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 SCAMP1O15126 338 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 EIF3DO15371 548 aaKnown RBP eCLIP12.58□□□□□ -0.4
ITM2C-209ENST00000543957 RTN2O75298 545 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 LATS1O95835 1130 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 CMA1P23946 247 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 MZF1P28698 734 aaPredicted RBP12.58□□□□□ -0.4
ITM2C-209ENST00000543957 DRD3P35462 400 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 TXLNAP40222 546 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 ASPAP45381 313 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 KRT85P78386 507 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 SRSF6Q13247 344 aaKnown RBP12.58□□□□□ -0.4
ITM2C-209ENST00000543957 MAPK8IP2Q13387 824 aaPredicted RBP12.58□□□□□ -0.4
ITM2C-209ENST00000543957 SETMARQ53H47 684 aaPredicted RBP12.58□□□□□ -0.4
ITM2C-209ENST00000543957 PIK3R6Q5UE93 754 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 CNNM4Q6P4Q7 775 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 RFWD3Q6PCD5 774 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 CCDC73Q6ZRK6 1079 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 TRIM69Q86WT6 500 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 MFN1Q8IWA4 741 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 FIBINQ8TAL6 211 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 PLEKHO2Q8TD55 490 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 LMLNQ96KR4 655 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 STIM2Q9P246 746 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 INTS6Q9UL03 887 aaKnown RBP12.58□□□□□ -0.4
ITM2C-209ENST00000543957 ERVW-1Q9UQF0 538 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 HPSEQ9Y251 543 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 SPTBN1Q01082 2364 aaKnown RBP12.58□□□□□ -0.4
ITM2C-209ENST00000543957 TDRD6O60522 2096 aaKnown RBP12.58□□□□□ -0.4
ITM2C-209ENST00000543957 KIF26BQ2KJY2 2108 aa12.58□□□□□ -0.4
ITM2C-209ENST00000543957 ANKRD17O75179 2603 aaKnown RBP12.57□□□□□ -0.4
ITM2C-209ENST00000543957 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.57□□□□□ -0.4
ITM2C-209ENST00000543957 SLC7A4O43246 635 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 PLRG1O43660 514 aaKnown RBP12.57□□□□□ -0.4
ITM2C-209ENST00000543957 NOBOXO60393 691 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 RNGTTO60942 597 aaKnown RBP12.57□□□□□ -0.4
ITM2C-209ENST00000543957 NEBLO76041 1014 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 RPN1P04843 607 aaKnown RBP12.57□□□□□ -0.4
ITM2C-209ENST00000543957 SRPRAP08240 638 aaKnown RBP12.57□□□□□ -0.4
ITM2C-209ENST00000543957 STAT6P42226 847 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 ME1P48163 572 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 SNRPFP62306 86 aaKnown RBP12.57□□□□□ -0.4
ITM2C-209ENST00000543957 CLDN10P78369 228 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 INCA1Q0VD86 236 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 ZNF177Q13360 481 aaPredicted RBP12.57□□□□□ -0.4
ITM2C-209ENST00000543957 TGIF1Q15583 401 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 IGFBP7Q16270 282 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 TBR1Q16650 682 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 CDKN3Q16667 212 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 PPP1R26Q5T8A7 1209 aaPredicted RBP12.57□□□□□ -0.4
ITM2C-209ENST00000543957 SPOPLQ6IQ16 392 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 EPM2AIP1Q7L775 607 aaPredicted RBP12.57□□□□□ -0.4
ITM2C-209ENST00000543957 EFL1Q7Z2Z2 1120 aaKnown RBP12.57□□□□□ -0.4
ITM2C-209ENST00000543957 C14orf80Q86SX3 495 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 NELFCDQ8IXH7 590 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 FAM26EQ8N5C1 309 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 PDILTQ8N807 584 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 TMEM145Q8NBT3 493 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 TPCN2Q8NHX9 752 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 PARD3BQ8TEW8 1205 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 PTPRN2Q92932 1015 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 FAM131CQ96AQ9 280 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 SPATA32Q96LK8 384 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 SCAND2PQ9GZW5 306 aaPredicted RBP12.57□□□□□ -0.4
ITM2C-209ENST00000543957 EPN3Q9H201 632 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 OLA1Q9NTK5 396 aaKnown RBP12.57□□□□□ -0.4
ITM2C-209ENST00000543957 GEMIN8Q9NWZ8 242 aaKnown RBP12.57□□□□□ -0.4
ITM2C-209ENST00000543957 SFMBT1Q9UHJ3 866 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 SLCO3A1Q9UIG8 710 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 ATP6V1DQ9Y5K8 247 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 ITIH6Q6UXX5 1313 aa12.57□□□□□ -0.4
ITM2C-209ENST00000543957 CCDC187A0A096LP49 1063 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 GOLGA6L7A0A1B0GV03 622 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 BLACEA4D250 179 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 LRRIQ3A6PVS8 624 aaPredicted RBP12.56□□□□□ -0.4
ITM2C-209ENST00000543957 EXOC3O60645 756 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 TCEA3O75764 348 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 SLC5A2P31639 672 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 CTSOP43234 321 aaPredicted RBP12.56□□□□□ -0.4
ITM2C-209ENST00000543957 METAP1P53582 386 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 FOXK1P85037 733 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 ELAVL3Q14576 367 aaKnown RBP12.56□□□□□ -0.4
ITM2C-209ENST00000543957 RAB41Q5JT25 222 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 ZCCHC8Q6NZY4 707 aaKnown RBP12.56□□□□□ -0.4
ITM2C-209ENST00000543957 GUSBP11Q6P575 273 aa12.56□□□□□ -0.4
ITM2C-209ENST00000543957 CRTC1Q6UUV9 634 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms