RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 AHCYP23526 432 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 GSTM2P28161 218 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 ALDH5A1P51649 535 aaPredicted RBP9.07□□□□□ -0.96
VPS13D-212ENST00000543766 SLFN12LQ6IEE8 588 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 ZNF589Q86UQ0 364 aaPredicted RBP9.07□□□□□ -0.96
VPS13D-212ENST00000543766 ZSWIM9Q86XI8 627 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 CROCCP3Q8IVE0 287 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 CELF1Q92879 486 aaKnown RBP9.07□□□□□ -0.96
VPS13D-212ENST00000543766 UPF1Q92900 1129 aaKnown RBP eCLIP9.07□□□□□ -0.96
VPS13D-212ENST00000543766 LRRC1Q9BTT6 524 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 MAT2BQ9NZL9 334 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 SLC24A2Q9UI40 661 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 GGT7Q9UJ14 662 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 CASZ1Q86V15 1759 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 FRMPD2Q68DX3 1309 aaPredicted RBP9.07□□□□□ -0.96
VPS13D-212ENST00000543766 RNF225M0QZC1 329 aaPredicted RBP9.07□□□□□ -0.96
VPS13D-212ENST00000543766 GPR171O14626 319 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 SLC9A3R1O14745 358 aaPredicted RBP9.07□□□□□ -0.96
VPS13D-212ENST00000543766 SORBS3O60504 671 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 PPP6R2O75170 966 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 SERPINB2P05120 415 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 TBXAS1P24557 533 aaPredicted RBP9.07□□□□□ -0.96
VPS13D-212ENST00000543766 TPTEP56180 551 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 CARTPTQ16568 116 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 ZNF827Q17R98 1081 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 FNDC3BQ53EP0 1204 aaKnown RBP9.07□□□□□ -0.96
VPS13D-212ENST00000543766 C8orf74Q6P047 294 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 ABRAXAS1Q6UWZ7 409 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 C4orf50Q6ZRC1 276 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 TXNRD3Q86VQ6 643 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 CREG2Q8IUH2 290 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 NEDD1Q8NHV4 660 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 BSNDQ8WZ55 320 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 SSX3Q99909 188 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 RNPEPQ9H4A4 650 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 MAN1B1Q9UKM7 699 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 APOBEC2Q9Y235 224 aaKnown RBP9.07□□□□□ -0.96
VPS13D-212ENST00000543766 ZNF175Q9Y473 711 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 NFE2L3Q9Y4A8 694 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 A0A0G2JS52 829 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 GMNCA6NCL1 334 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 CFAP73A6NFT4 308 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 HMX3A6NHT5 357 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 EYA2O00167 538 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 TXNDC9O14530 226 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 APOA1P02647 267 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 FCER2P06734 321 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 FGF4P08620 206 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 NCF1P14598 390 aaPredicted RBP9.07□□□□□ -0.96
VPS13D-212ENST00000543766 PFKLP17858 780 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 MAPK4P31152 587 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 SHMT1P34896 483 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 GSTM5P46439 218 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 PITPNBP48739 271 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 ZC2HC1CQ53FD0 456 aaPredicted RBP9.07□□□□□ -0.96
VPS13D-212ENST00000543766 RAET1GQ6H3X3 334 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 COMTD1Q86VU5 262 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 TIGD4Q8IY51 512 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 KCTD6Q8NC69 237 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 NCOA7Q8NI08 942 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 TRPM4Q8TD43 1214 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 VPS33AQ96AX1 596 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 ACSF2Q96CM8 615 aaPredicted RBP9.07□□□□□ -0.96
VPS13D-212ENST00000543766 DPH5Q9H2P9 285 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 CUEDC2Q9H467 287 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 PTTG2Q9NZH5 202 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 TBC1D29Q9UFV1 150 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 ZNF225Q9UK10 706 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 CDV3Q9UKY7 258 aaKnown RBP9.07□□□□□ -0.96
VPS13D-212ENST00000543766 VPS9D1Q9Y2B5 631 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 LRCH1Q9Y2L9 728 aa9.07□□□□□ -0.96
VPS13D-212ENST00000543766 TEX46H3BTG2 121 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 ACAA1P09110 424 aaPredicted RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 RGS2P41220 211 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 HERVK_113P62684 666 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 S100A12P80511 92 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 CYP24A1Q07973 514 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 MTHFSDQ2M296 383 aaKnown RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 AKAP4Q5JQC9 854 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 ATAD3BQ5T9A4 648 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 HEATR6Q6AI08 1181 aaKnown RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 STOX1Q6ZVD7 989 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 PAGE2Q7Z2X7 111 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 GLRX5Q86SX6 157 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 CNGA4Q8IV77 575 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 RFKQ969G6 155 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 MFSD14AQ96MC6 490 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 ABHD10Q9NUJ1 306 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 KCND3Q9UK17 655 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 IFT52Q9Y366 437 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 PCDHA5Q9Y5H7 936 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 HSBP1L1C9JCN9 74 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 J3QW42 95 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 FOXO3O43524 673 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 PI15O43692 258 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 CTNND1O60716 968 aaKnown RBP9.06□□□□□ -0.96
VPS13D-212ENST00000543766 CCDC22O60826 627 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 TJP3O95049 919 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 SRGAP2CP0DJJ0 459 aa9.06□□□□□ -0.96
VPS13D-212ENST00000543766 HOXB1P14653 301 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms