RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PRRT4C9JH25 899 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 K7EQS6 105 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 CBX4O00257 560 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 DFFAO00273 331 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 GFRA2O00451 464 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 LAMTOR5O43504 91 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 PSTPIP1O43586 416 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 TIMM44O43615 452 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 SYNCRIPO60506 623 aaKnown RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 GPR37L1O60883 481 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 RAMP2O60895 175 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 FTCDO95954 541 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 ASLP04424 464 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 CHRNB1P11230 501 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 ERCC2P18074 760 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 AMPD1P23109 780 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 MSNP26038 577 aaKnown RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 MZF1P28698 734 aaPredicted RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 SERPINB6P35237 376 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 RPS9P46781 194 aaKnown RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 MRPS21P82921 87 aaKnown RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 ECT2LQ008S8 904 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 GNA12Q03113 381 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 SULT2A1Q06520 285 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 MESP2Q0VG99 397 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 MMRN1Q13201 1228 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 CCINQ13939 588 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 DMC1Q14565 340 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 STARD3Q14849 445 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 POLD3Q15054 466 aaPredicted RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 EIF4HQ15056 248 aaKnown RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 DPYSL2Q16555 572 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 PLEKHG6Q3KR16 790 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 FUT11Q495W5 492 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 C5orf22Q49AR2 442 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 ACCSLQ4AC99 568 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 EOGTQ5NDL2 527 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 CCDC181Q5TID7 509 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 EMC10Q5UCC4 262 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 EGFLAMQ63HQ2 1017 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 KAZNQ674X7 775 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 TMCO3Q6UWJ1 677 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 SERPINA13PQ6UXR4 307 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 ZNF783Q6ZMS7 281 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 Q6ZS52 159 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 RFX8Q6ZV50 586 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 POLNQ7Z5Q5 900 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 BMP8AQ7Z5Y6 402 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 SFTPA1Q8IWL2 248 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 ZNF683Q8IZ20 524 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 APCDD1Q8J025 514 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 PGBD3Q8N328 593 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 PHTF2Q8N3S3 785 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 ALLCQ8N6M5 410 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 RTL3Q8N8U3 475 aaKnown RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 TXNDC5Q8NBS9 432 aaKnown RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 CYB5D2Q8WUJ1 264 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 ATRIPQ8WXE1 791 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 SORCS1Q8WY21 1168 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 RNF25Q96BH1 459 aaPredicted RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 ERLEC1Q96DZ1 483 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 CELF6Q96J87 481 aaKnown RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 C2orf49Q9BVC5 232 aaPredicted RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 KCNF1Q9H3M0 494 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 RETREG1Q9H6L5 497 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 PCDH18Q9HCL0 1135 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 POLMQ9NP87 494 aaPredicted RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 TMEM248Q9NWD8 314 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 ELOVL2Q9NXB9 296 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 TRMT1Q9NXH9 659 aaKnown RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 CWC15Q9P013 229 aaKnown RBP6.48□□□□□ -1.37
LTBR-212ENST00000543542 BCCIPQ9P287 314 aaKnown RBP eCLIP6.48□□□□□ -1.37
LTBR-212ENST00000543542 FBXO10Q9UK96 956 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 VCANP13611 3396 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 DOCK4Q8N1I0 1966 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 A0A0A0MRY4 1105 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 ILVBLA1L0T0 632 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 CCDC66A2RUB6 948 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 GRID2IPA4D2P6 1211 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 ARHGAP42A6NI28 874 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 SHISA7A6NL88 538 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 RASA4BC9J798 803 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 NPC1O15118 1278 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 RASA4O43374 803 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 BNIP3LO60238 219 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 NEBLO76041 1014 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 ALDH1A2O94788 518 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 ZRANB2O95218 330 aaKnown RBP eCLIP6.47□□□□□ -1.37
LTBR-212ENST00000543542 EPHX1P07099 455 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 SRPRAP08240 638 aaKnown RBP6.47□□□□□ -1.37
LTBR-212ENST00000543542 CD48P09326 243 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 DLDP09622 509 aaKnown RBP6.47□□□□□ -1.37
LTBR-212ENST00000543542 HOXB2P14652 356 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 KDELR1P24390 212 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 AVPR2P30518 371 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 NTSR1P30989 418 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 ACVRL1P37023 503 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 CXCL12P48061 93 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 HCAR3P49019 387 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 CCR3P51677 355 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms