RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 TMEM270Q6UE05 265 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 FKBP9P1Q75LS8 142 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 RTL10Q7L3V2 364 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 OVCH2Q7RTZ1 564 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 LMNTD2Q8IXW0 634 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 CRYBG2Q8N1P7 616 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 ELMOD1Q8N336 334 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 C12orf76Q8N812 135 aaPredicted RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 ATAD1Q8NBU5 361 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 MYCBPAPQ8TBZ2 947 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 SPPL2BQ8TCT7 592 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 MYLPFQ96A32 169 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 JAKMIP2Q96AA8 810 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 TMEM176AQ96HP8 235 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 PIDD1Q9HB75 910 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 TMLHEQ9NVH6 421 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 ZDHHC7Q9NXF8 308 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 CACNA2D2Q9NY47 1150 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 CLEC1BQ9P126 229 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 HSFX1Q9UBD0 423 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 HMGXB4Q9UGU5 601 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 FEZ2Q9UHY8 353 aaPredicted RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 CD207Q9UJ71 328 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 DNAJC12Q9UKB3 198 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 CORINQ9Y5Q5 1042 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 ATP8B3O60423 1300 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 EYSQ5T1H1 3165 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 VWA8A3KMH1 1905 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 PRRC2BQ5JSZ5 2229 aaKnown RBP5.35□□□□□ -1.55
CLIP1-217ENST00000543205 CACNA1AO00555 2505 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 H3BQ06 376 aaPredicted RBP5.35□□□□□ -1.55
CLIP1-217ENST00000543205 CLGNO14967 610 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 AREL1O15033 823 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 CCL16O15467 120 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 TBX10O75333 385 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 H2AFYO75367 372 aaKnown RBP5.35□□□□□ -1.55
CLIP1-217ENST00000543205 ZBED1O96006 694 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 ITGAVP06756 1048 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 HNRNPA1P09651 372 aaKnown RBP eCLIP5.35□□□□□ -1.55
CLIP1-217ENST00000543205 HAPLN1P10915 354 aaPredicted RBP5.35□□□□□ -1.55
CLIP1-217ENST00000543205 DRD2P14416 443 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 CD19P15391 556 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 CYP2F1P24903 491 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 ANXA13P27216 316 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 ADORA2BP29275 332 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 LTBRP36941 435 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 PRIM2P49643 509 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 KLK7P49862 253 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 EPHB3P54753 998 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 RPL10AP62906 217 aaKnown RBP5.35□□□□□ -1.55
CLIP1-217ENST00000543205 ID3Q02535 119 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 ITIH3Q06033 890 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 DLX2Q07687 328 aaPredicted RBP5.35□□□□□ -1.55
CLIP1-217ENST00000543205 TWF1Q12792 350 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 SYCP1Q15431 976 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 TAF12Q16514 161 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 ARHGAP44Q17R89 818 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 AAK1Q2M2I8 961 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 ATAT1Q5SQI0 421 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 GJB7Q6PEY0 223 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 TMC5Q6UXY8 1006 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 APTXQ7Z2E3 356 aaKnown RBP5.35□□□□□ -1.55
CLIP1-217ENST00000543205 SCN4BQ8IWT1 228 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 OR2C3Q8N628 320 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 CLRN3Q8NCR9 226 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 NEK11Q8NG66 645 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 PPP1R35Q8TAP8 253 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 KAT5Q92993 513 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 PCED1BQ96HM7 432 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 ZNF512Q96ME7 567 aaPredicted RBP5.35□□□□□ -1.55
CLIP1-217ENST00000543205 RIPOR3Q96MK2 946 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 ERGIC2Q96RQ1 377 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 TWNKQ96RR1 684 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 PKMYT1Q99640 499 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 XPO4Q9C0E2 1151 aaKnown RBP5.35□□□□□ -1.55
CLIP1-217ENST00000543205 ELOVL4Q9GZR5 314 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 ADAM7Q9H2U9 754 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 EMC7Q9NPA0 242 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 SIX2Q9NPC8 291 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 ITM2CQ9NQX7 267 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 FAM207AQ9NSI2 230 aaPredicted RBP5.35□□□□□ -1.55
CLIP1-217ENST00000543205 FAM49BQ9NUQ9 324 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 GIMAP2Q9UG22 337 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 SUSD2Q9UGT4 822 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 NME7Q9Y5B8 376 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 INSL5Q9Y5Q6 135 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 AGRPO00253 132 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 CLDN5O00501 218 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 TMPRSS2O15393 492 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 TEX33O43247 280 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 RFPL2O75678 378 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 SOAT2O75908 522 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 HTR3BO95264 441 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 VNN2O95498 520 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 CAPNS1P04632 268 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 PAEPP09466 180 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 CCDC130P13994 396 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 UCHL3P15374 230 aa5.35□□□□□ -1.55
CLIP1-217ENST00000543205 ACO1P21399 889 aaKnown RBP5.35□□□□□ -1.55
CLIP1-217ENST00000543205 HOXA9P31269 272 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms