RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 CTGFP29279 349 aa16.97■□□□□ 0.31
KDM2B-216ENST00000543025 ROR2Q01974 943 aaKnown RBP16.97■□□□□ 0.31
KDM2B-216ENST00000543025 CCNIQ14094 377 aa16.97■□□□□ 0.31
KDM2B-216ENST00000543025 GRIK4Q16099 956 aa16.97■□□□□ 0.31
KDM2B-216ENST00000543025 KIZQ2M2Z5 673 aa16.97■□□□□ 0.31
KDM2B-216ENST00000543025 ZNF792Q3KQV3 632 aa16.97■□□□□ 0.31
KDM2B-216ENST00000543025 DCAF6Q58WW2 860 aa16.97■□□□□ 0.31
KDM2B-216ENST00000543025 FSCBQ5H9T9 825 aa16.97■□□□□ 0.31
KDM2B-216ENST00000543025 PID1Q7Z2X4 250 aa16.97■□□□□ 0.31
KDM2B-216ENST00000543025 PDSS2Q86YH6 399 aa16.97■□□□□ 0.31
KDM2B-216ENST00000543025 DDX50Q9BQ39 737 aaKnown RBP16.97■□□□□ 0.31
KDM2B-216ENST00000543025 CCDC28BQ9BUN5 200 aa16.97■□□□□ 0.31
KDM2B-216ENST00000543025 EIF2AQ9BY44 585 aaKnown RBP16.97■□□□□ 0.31
KDM2B-216ENST00000543025 SHCBP1LQ9BZQ2 653 aa16.97■□□□□ 0.31
KDM2B-216ENST00000543025 DNAI2Q9GZS0 605 aa16.97■□□□□ 0.31
KDM2B-216ENST00000543025 LRRC40Q9H9A6 602 aa16.97■□□□□ 0.31
KDM2B-216ENST00000543025 HES2Q9Y543 173 aa16.97■□□□□ 0.31
KDM2B-216ENST00000543025 ADCY6O43306 1168 aa16.96■□□□□ 0.31
KDM2B-216ENST00000543025 DAB1O75553 588 aa16.96■□□□□ 0.31
KDM2B-216ENST00000543025 PRDX6P30041 224 aa16.96■□□□□ 0.31
KDM2B-216ENST00000543025 PAFAH1B3Q15102 231 aaKnown RBP16.96■□□□□ 0.31
KDM2B-216ENST00000543025 CFAP157Q5JU67 520 aa16.96■□□□□ 0.31
KDM2B-216ENST00000543025 MARCH8Q5T0T0 291 aa16.96■□□□□ 0.31
KDM2B-216ENST00000543025 MAMDC4Q6UXC1 1216 aa16.96■□□□□ 0.31
KDM2B-216ENST00000543025 DEFB107AQ8IZN7 70 aa16.96■□□□□ 0.31
KDM2B-216ENST00000543025 CCDC124Q96CT7 223 aaKnown RBP16.96■□□□□ 0.31
KDM2B-216ENST00000543025 FCRL3Q96P31 734 aaPredicted RBP16.96■□□□□ 0.31
KDM2B-216ENST00000543025 TUBGCP5Q96RT8 1024 aa16.96■□□□□ 0.31
KDM2B-216ENST00000543025 SNX25Q9H3E2 840 aa16.96■□□□□ 0.31
KDM2B-216ENST00000543025 COG4Q9H9E3 785 aa16.96■□□□□ 0.31
KDM2B-216ENST00000543025 UBQLN1Q9UMX0 589 aaKnown RBP16.96■□□□□ 0.31
KDM2B-216ENST00000543025 GINS2Q9Y248 185 aa16.96■□□□□ 0.31
KDM2B-216ENST00000543025 KPNA7A9QM74 516 aa16.96■□□□□ 0.3
KDM2B-216ENST00000543025 XPO1O14980 1071 aaKnown RBP16.96■□□□□ 0.3
KDM2B-216ENST00000543025 ITGAXP20702 1163 aa16.96■□□□□ 0.3
KDM2B-216ENST00000543025 LIMK2P53671 638 aa16.96■□□□□ 0.3
KDM2B-216ENST00000543025 ADIGQ0VDE8 80 aa16.96■□□□□ 0.3
KDM2B-216ENST00000543025 FRMD7Q6ZUT3 714 aa16.96■□□□□ 0.3
KDM2B-216ENST00000543025 MFN1Q8IWA4 741 aa16.96■□□□□ 0.3
KDM2B-216ENST00000543025 TNS4Q8IZW8 715 aa16.96■□□□□ 0.3
KDM2B-216ENST00000543025 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.96■□□□□ 0.3
KDM2B-216ENST00000543025 OR52K1Q8NGK4 314 aa16.96■□□□□ 0.3
KDM2B-216ENST00000543025 EMID1Q96A84 441 aaPredicted RBP16.96■□□□□ 0.3
KDM2B-216ENST00000543025 CDH19Q9H159 772 aa16.96■□□□□ 0.3
KDM2B-216ENST00000543025 EBF3Q9H4W6 596 aa16.96■□□□□ 0.3
KDM2B-216ENST00000543025 TMPRSS4Q9NRS4 437 aa16.96■□□□□ 0.3
KDM2B-216ENST00000543025 POMPQ9Y244 141 aa16.96■□□□□ 0.3
KDM2B-216ENST00000543025 LOC100653049A0A140TA62 436 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 E2F8A0AVK6 867 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 CLGNO14967 610 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 DCXO43602 365 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 KRT34O76011 436 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 SORBS2O94875 1100 aaKnown RBP16.95■□□□□ 0.3
KDM2B-216ENST00000543025 HSPA4LO95757 839 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 GMPRP36959 345 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 CUL3Q13618 768 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 MORN1Q5T089 497 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 OTUD1Q5VV17 481 aaPredicted RBP16.95■□□□□ 0.3
KDM2B-216ENST00000543025 ALKAL1Q6UXT8 129 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 RNF111Q6ZNA4 994 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 ACAD11Q709F0 780 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 CATSPER4Q7RTX7 472 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 STRA8Q7Z7C7 330 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 PIGZQ86VD9 579 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 PLD6Q8N2A8 252 aaKnown RBP16.95■□□□□ 0.3
KDM2B-216ENST00000543025 ZNF781Q8N8C0 355 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 ZFAND2BQ8WV99 257 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 SREK1Q8WXA9 508 aaKnown RBP16.95■□□□□ 0.3
KDM2B-216ENST00000543025 ZNF669Q96BR6 464 aaPredicted RBP16.95■□□□□ 0.3
KDM2B-216ENST00000543025 ATXN7L3BQ96GX2 97 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 KLHL8Q9P2G9 620 aaPredicted RBP16.95■□□□□ 0.3
KDM2B-216ENST00000543025 ARHGAP26Q9UNA1 814 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 SYNJ2BP-COX16A0A087WUM0 186 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 PIRO00625 290 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 NOS2P35228 1153 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 XIAPP98170 497 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 TBL3Q12788 808 aaKnown RBP16.95■□□□□ 0.3
KDM2B-216ENST00000543025 USP4Q13107 963 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 C11orf91Q3C1V1 193 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 CWF19L1Q69YN2 538 aaKnown RBP16.95■□□□□ 0.3
KDM2B-216ENST00000543025 FSTL4Q6MZW2 842 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 NOTUMQ6P988 496 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 EPGNQ6UW88 154 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 TMEM135Q86UB9 458 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 PHTF2Q8N3S3 785 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 FBXW8Q8N3Y1 598 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 NDRG1Q92597 394 aaKnown RBP16.95■□□□□ 0.3
KDM2B-216ENST00000543025 NT5C3BQ969T7 300 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 ZNF560Q96MR9 790 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 ARHGAP39Q9C0H5 1083 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 KLHL4Q9C0H6 718 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 VTA1Q9NP79 307 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 COX16Q9P0S2 106 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 STAP1Q9ULZ2 295 aa16.95■□□□□ 0.3
KDM2B-216ENST00000543025 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.94■□□□□ 0.3
KDM2B-216ENST00000543025 TMEM114B3SHH9 223 aa16.94■□□□□ 0.3
KDM2B-216ENST00000543025 KCNK1O00180 336 aa16.94■□□□□ 0.3
KDM2B-216ENST00000543025 EEF2KO00418 725 aaKnown RBP16.94■□□□□ 0.3
KDM2B-216ENST00000543025 ZNF189O75820 626 aaPredicted RBP16.94■□□□□ 0.3
KDM2B-216ENST00000543025 RECQL4O94761 1208 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms