RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 STK40Q8N2I9 435 aa17.98■□□□□ 0.47
PPP1CA-210ENST00000542876 ZNF606Q8WXB4 792 aa17.98■□□□□ 0.47
PPP1CA-210ENST00000542876 FAM129BQ96TA1 746 aa17.98■□□□□ 0.47
PPP1CA-210ENST00000542876 SRRTQ9BXP5 876 aaKnown RBP17.98■□□□□ 0.47
PPP1CA-210ENST00000542876 FAM204AQ9H8W3 233 aa17.98■□□□□ 0.47
PPP1CA-210ENST00000542876 GDF3Q9NR23 364 aa17.98■□□□□ 0.47
PPP1CA-210ENST00000542876 RAXQ9Y2V3 346 aa17.98■□□□□ 0.47
PPP1CA-210ENST00000542876 YKT6O15498 198 aa17.97■□□□□ 0.47
PPP1CA-210ENST00000542876 ARRB1P49407 418 aaPredicted RBP17.97■□□□□ 0.47
PPP1CA-210ENST00000542876 MORC3Q14149 939 aa17.97■□□□□ 0.47
PPP1CA-210ENST00000542876 DSG4Q86SJ6 1040 aa17.97■□□□□ 0.47
PPP1CA-210ENST00000542876 SERAC1Q96JX3 654 aa17.97■□□□□ 0.47
PPP1CA-210ENST00000542876 DKK4Q9UBT3 224 aa17.97■□□□□ 0.47
PPP1CA-210ENST00000542876 SYNJ2BP-COX16A0A087WUM0 186 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 TBC1D3DA0A087WVF3 549 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 TBC1D3IA0A087WXS9 549 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 TBC1D3EA0A087X179 549 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 TBC1D3KA0A087X1G2 549 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 TBC1D3FA6NER0 549 aaPredicted RBP17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 TRABD2BA6NFA1 517 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 TBC1D3LB9A6J9 549 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 TBC1D3HP0C7X1 549 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 PDGFRAP16234 1089 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 BMP6P22004 513 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 MZF1P28698 734 aaPredicted RBP17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 CCR1P32246 355 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 USP8P40818 1118 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 STK19P49842 368 aaPredicted RBP17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 MTA1Q13330 715 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 PDCLQ13371 301 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 SMAD1Q15797 465 aaKnown RBP17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 COL28A1Q2UY09 1125 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 PRAMEF14Q5SWL7 426 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 TBC1D3GQ6DHY5 549 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 TBC1D3CQ6IPX1 549 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 DHRS13Q6UX07 377 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 GATAD2AQ86YP4 633 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 CREBRFQ8IUR6 639 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 TBC1D3Q8IZP1 549 aaPredicted RBP17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 CCAR2Q8N163 923 aaKnown RBP17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 AADATQ8N5Z0 425 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 PDCD7Q8N8D1 485 aaKnown RBP17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 PTPRN2Q92932 1015 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 SPAG5Q96R06 1193 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 EBF2Q9HAK2 575 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 DDIT4Q9NX09 232 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 COX16Q9P0S2 106 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 CYTH4Q9UIA0 394 aa17.96■□□□□ 0.47
PPP1CA-210ENST00000542876 ACACAQ13085 2346 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 A0A1B0GVM2 712 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 FAM149AA5PLN7 773 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 TCAF2A6NFQ2 919 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 LDOC1O95751 146 aaPredicted RBP17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 IGLV3-25P01717 112 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 WNT1P04628 370 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 GLI1P08151 1106 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 CDK4P11802 303 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 ADPRHP54922 357 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 CYP4F3Q08477 520 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 KCNJ12Q14500 433 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 ACCSLQ4AC99 568 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 EFHC1Q5JVL4 640 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 FAM46CQ5VWP2 391 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 PRPF39Q86UA1 669 aaKnown RBP17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 PDZD3Q86UT5 571 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 TMPRSS12Q86WS5 348 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 MARCH9Q86YJ5 346 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 HNRNPLLQ8WVV9 542 aaKnown RBP17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 OR8D1Q8WZ84 308 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 RPRD1AQ96P16 312 aaPredicted RBP17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 NOX5Q96PH1 765 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 SLC25A13Q9UJS0 675 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 PCDHGA1Q9Y5H4 931 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 LAMA5O15230 3695 aa17.95■□□□□ 0.46
PPP1CA-210ENST00000542876 APC2O95996 2303 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 E9PAM4 449 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 ENC1O14682 589 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 HSF2BPO75031 334 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 HNF1BP35680 557 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 NUMBP49757 651 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 SNX16P57768 344 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 ACAP1Q15027 740 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 TAF5Q15542 800 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 ARHGAP44Q17R89 818 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 CIR1Q86X95 450 aaPredicted RBP17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 DEFB106AQ8N104 65 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 OXR1Q8N573 874 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 CNDP2Q96KP4 475 aaKnown RBP17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 PPP1R13BQ96KQ4 1090 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 PRMT1Q99873 361 aaKnown RBP17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 CRACR2AQ9BSW2 395 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 ACP6Q9NPH0 428 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 ASNSD1Q9NWL6 643 aa17.94■□□□□ 0.46
PPP1CA-210ENST00000542876 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.93■□□□□ 0.46
PPP1CA-210ENST00000542876 A0A1W2PR77 199 aa17.93■□□□□ 0.46
PPP1CA-210ENST00000542876 TLR4O00206 839 aa17.93■□□□□ 0.46
PPP1CA-210ENST00000542876 SLC7A4O43246 635 aa17.93■□□□□ 0.46
PPP1CA-210ENST00000542876 MAGEC1O60732 1142 aa17.93■□□□□ 0.46
PPP1CA-210ENST00000542876 C1SP09871 688 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms