RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 PTAR1Q7Z6K3 402 aaPredicted RBP8.37□□□□□ -1.07
PRKAB1-207ENST00000542698 ZNF410Q86VK4 478 aa8.37□□□□□ -1.07
PRKAB1-207ENST00000542698 PCDH20Q8N6Y1 951 aaKnown RBP8.37□□□□□ -1.07
PRKAB1-207ENST00000542698 BHLHE22Q8NFJ8 381 aaPredicted RBP8.37□□□□□ -1.07
PRKAB1-207ENST00000542698 RP9Q8TA86 221 aaKnown RBP8.37□□□□□ -1.07
PRKAB1-207ENST00000542698 GTF3C2Q8WUA4 911 aaPredicted RBP8.37□□□□□ -1.07
PRKAB1-207ENST00000542698 STRA6Q9BX79 667 aa8.37□□□□□ -1.07
PRKAB1-207ENST00000542698 COG4Q9H9E3 785 aa8.37□□□□□ -1.07
PRKAB1-207ENST00000542698 DMAP1Q9NPF5 467 aaPredicted RBP8.37□□□□□ -1.07
PRKAB1-207ENST00000542698 RHBDL2Q9NX52 303 aa8.37□□□□□ -1.07
PRKAB1-207ENST00000542698 RAP2CQ9Y3L5 183 aa8.37□□□□□ -1.07
PRKAB1-207ENST00000542698 WASF2Q9Y6W5 498 aa8.37□□□□□ -1.07
PRKAB1-207ENST00000542698 COL14A1Q05707 1796 aaKnown RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 CCDC88AQ3V6T2 1871 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 CXCL11O14625 94 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 TYROBPO43914 113 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 SMNDC1O75940 238 aaKnown RBP eCLIP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 THP07101 528 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 HMOX2P30519 316 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 ICAM3P32942 547 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 PRKD1Q15139 912 aaPredicted RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 MAPRE1Q15691 268 aaKnown RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 NRF1Q16656 503 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 UBAP2Q5T6F2 1119 aaKnown RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 SH3PXD2AQ5TCZ1 1133 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 HPS6Q86YV9 775 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 SLC22A9Q8IVM8 553 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 B4GALNT2Q8NHY0 566 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 PCDH19Q8TAB3 1148 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 BLOC1S5Q8TDH9 187 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 FAM136AQ96C01 138 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 ZNF333Q96JL9 665 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 SYT15Q9BQS2 421 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 KATNAL1Q9BW62 490 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 ULBP1Q9BZM6 244 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 C6orf203Q9P0P8 240 aaPredicted RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 OR12D3Q9UGF7 316 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 ZNF214Q9UL59 606 aaPredicted RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 AP4S1Q9Y587 144 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 KANSL1LA0AUZ9 987 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 TTC36A6NLP5 189 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 TNPO2O14787 897 aaKnown RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 MRASO14807 208 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 BNIP3LO60238 219 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 MGEA5O60502 916 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 PLIN3O60664 434 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 MSCO60682 206 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 CABYRO75952 493 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 RHOBTB1O94844 696 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 UQCRBP14927 111 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 VCLP18206 1134 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 GPD2P43304 727 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 FOLH1Q04609 750 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 KLF10Q13118 480 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 CAPRIN1Q14444 709 aaKnown RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 PAN2Q504Q3 1202 aaKnown RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 METTL21CQ5VZV1 264 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 LRRC8BQ6P9F7 803 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 DHFR2Q86XF0 187 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 GRIP2Q9C0E4 1043 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 SPON1Q9HCB6 807 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 RIC8BQ9NVN3 520 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 SYBUQ9NX95 663 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 PRKAG3Q9UGI9 489 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 BLOC1S6Q9UL45 172 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 COMMD3-BMI1R4GMX3 469 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 SLC15A5A6NIM6 579 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 NR5A2O00482 541 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 MDM4O15151 490 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 SOAT2O75908 522 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 LTFP02788 710 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 NFKBIAP25963 317 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 MSX2P35548 267 aaPredicted RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 CSE1LP55060 971 aaKnown RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 GPR162Q16538 588 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 FUT11Q495W5 492 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 PPM1JQ5JR12 505 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 TBCELQ5QJ74 424 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 NEPROQ6NW34 567 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 LPCAT2Q7L5N7 544 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 STRADAQ7RTN6 431 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 EFL1Q7Z2Z2 1120 aaKnown RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 PQLC1Q8N2U9 271 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 FBXW8Q8N3Y1 598 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 DIS3LQ8TF46 1054 aaKnown RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 SNRNP27Q8WVK2 155 aaKnown RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 MCRS1Q96EZ8 462 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 HERPUD2Q9BSE4 406 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 SLC25A23Q9BV35 468 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 PRKD2Q9BZL6 878 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 TKTL2Q9H0I9 626 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 WDR55Q9H6Y2 383 aaPredicted RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 NDFIP2Q9NV92 336 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 SLC7A8Q9UHI5 535 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 LRFN2Q9ULH4 789 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 ZMYND8Q9ULU4 1186 aaPredicted RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 PRPF19Q9UMS4 504 aaKnown RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 NENFQ9UMX5 172 aa8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 MYO5AQ9Y4I1 1855 aaKnown RBP8.36□□□□□ -1.07
PRKAB1-207ENST00000542698 ADGRA2Q96PE1 1338 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms