RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 FOXN3O00409 490 aaPredicted RBP10.93□□□□□ -0.66
GABRB3-204ENST00000541819 SLC9A3R1O14745 358 aaPredicted RBP10.93□□□□□ -0.66
GABRB3-204ENST00000541819 PROSCO94903 275 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 GYPCP04921 128 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 HOXC6P09630 235 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 RPL9P32969 192 aaKnown RBP10.93□□□□□ -0.66
GABRB3-204ENST00000541819 EPHX2P34913 555 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 MYBPC1Q00872 1141 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 CREMQ03060 361 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 ACSM2AQ08AH3 577 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 INTS11Q5TA45 600 aaKnown RBP10.93□□□□□ -0.66
GABRB3-204ENST00000541819 ACSM2BQ68CK6 577 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 ARPINQ7Z6K5 226 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.93□□□□□ -0.66
GABRB3-204ENST00000541819 PALB2Q86YC2 1186 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 CCDC185Q8N715 623 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 NEK7Q8TDX7 302 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 MTFMTQ96DP5 389 aaKnown RBP10.93□□□□□ -0.66
GABRB3-204ENST00000541819 FDXACB1Q9BRP7 624 aaPredicted RBP10.93□□□□□ -0.66
GABRB3-204ENST00000541819 SPATA5L1Q9BVQ7 753 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 REEP1Q9H902 201 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 PHF11Q9UIL8 331 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 INVSQ9Y283 1065 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 PPP2R3BQ9Y5P8 575 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 TAF4O00268 1085 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 SERPINE1P05121 402 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 FMO4P31512 558 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 ADIGQ0VDE8 80 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 LAMTOR4Q0VGL1 99 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 KCNMA1Q12791 1236 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 PEX6Q13608 980 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 BMPR2Q13873 1038 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 FAM187BQ17R55 369 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 INO80DQ53TQ3 878 aaPredicted RBP10.93□□□□□ -0.66
GABRB3-204ENST00000541819 PCNX4Q63HM2 1172 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 FAAH2Q6GMR7 532 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 EIF3MQ7L2H7 374 aaKnown RBP10.93□□□□□ -0.66
GABRB3-204ENST00000541819 RNF145Q96MT1 663 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 ELOVL4Q9GZR5 314 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 POMKQ9H5K3 350 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 PTPRHQ9HD43 1115 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 CYLDQ9NQC7 956 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 INTS7Q9NVH2 962 aaKnown RBP10.93□□□□□ -0.66
GABRB3-204ENST00000541819 BARX2Q9UMQ3 279 aaPredicted RBP10.93□□□□□ -0.66
GABRB3-204ENST00000541819 PCDHA3Q9Y5H8 950 aa10.93□□□□□ -0.66
GABRB3-204ENST00000541819 ARHGEF5Q12774 1597 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 LAMC1P11047 1609 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 WDR27A2RRH5 827 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 MT-CO1P00395 513 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 ANXA5P08758 320 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 CDC42P60953 191 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 TIMM50Q3ZCQ8 353 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 ALKBH2Q6NS38 261 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 KIAA1324Q6UXG2 1013 aaKnown RBP10.92□□□□□ -0.66
GABRB3-204ENST00000541819 PRR23CQ6ZRP0 262 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 TC2NQ8N9U0 490 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 HGH1Q9BTY7 390 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 SLC39A8Q9C0K1 460 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 DCLRE1BQ9H816 532 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 SLC35C2Q9NQQ7 365 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 PXMP2Q9NR77 195 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 ARL15Q9NXU5 204 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 AGRPO00253 132 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 MRASO14807 208 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 AXLP30530 894 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 CRATP43155 626 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 BACE1P56817 501 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 C21orf59P57076 290 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 MYL6P60660 151 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 TRIM28Q13263 835 aaKnown RBP10.92□□□□□ -0.66
GABRB3-204ENST00000541819 NAB1Q13506 487 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 CCNG2Q16589 344 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 GPSM3Q9Y4H4 160 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 ZMYM2Q9UBW7 1377 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 TBC1D3BA6NDS4 549 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 RARGP13631 454 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 TPH1P17752 444 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 NFKB1P19838 968 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 PTPN4P29074 926 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 TPP2P29144 1249 aaPredicted RBP10.92□□□□□ -0.66
GABRB3-204ENST00000541819 RPL4P36578 427 aaKnown RBP10.92□□□□□ -0.66
GABRB3-204ENST00000541819 GP5P40197 560 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 IRAK1P51617 712 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 TRMT5Q32P41 509 aaKnown RBP10.92□□□□□ -0.66
GABRB3-204ENST00000541819 IL27RAQ6UWB1 636 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 GPSM1Q86YR5 675 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 ADGRG2Q8IZP9 1017 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 ZNF248Q8NDW4 579 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 COL26A1Q96A83 441 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 CLIP3Q96DZ5 547 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 C9orf16Q9BUW7 83 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 PRRG4Q9BZD6 226 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 CAB39LQ9H9S4 337 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 C1QTNF3-AMACRE9PGA6 284 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 CLOCKO15516 846 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 PRODHO43272 600 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 CATP04040 527 aaKnown RBP10.92□□□□□ -0.66
GABRB3-204ENST00000541819 CLUP10909 449 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 POLD2P49005 469 aa10.92□□□□□ -0.66
GABRB3-204ENST00000541819 NEK3P51956 506 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms