RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 CDT1Q9H211 546 aa6.87□□□□□ -1.31
TTR-203ENST00000541025 ZHX3Q9H4I2 956 aa6.87□□□□□ -1.31
TTR-203ENST00000541025 PARVGQ9HBI0 331 aa6.87□□□□□ -1.31
TTR-203ENST00000541025 USP36Q9P275 1121 aaKnown RBP6.87□□□□□ -1.31
TTR-203ENST00000541025 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
TTR-203ENST00000541025 CFAP45Q9UL16 551 aa6.87□□□□□ -1.31
TTR-203ENST00000541025 TNFSF13BQ9Y275 285 aa6.87□□□□□ -1.31
TTR-203ENST00000541025 GDAQ9Y2T3 454 aa6.87□□□□□ -1.31
TTR-203ENST00000541025 REXO2Q9Y3B8 237 aaKnown RBP6.87□□□□□ -1.31
TTR-203ENST00000541025 MUC3AQ02505 3323 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 DOCK6Q96HP0 2047 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 FRMD3A2A2Y4 597 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 TISP43B9A030 160 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 ALG1L2C9J202 215 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 K7ENM7 598 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 NRP1O14786 923 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 POLR2DO15514 142 aaKnown RBP6.86□□□□□ -1.31
TTR-203ENST00000541025 LINC01565O15544 149 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 OPHN1O60890 802 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 TBCAO75347 108 aaKnown RBP6.86□□□□□ -1.31
TTR-203ENST00000541025 IPO13O94829 963 aaKnown RBP6.86□□□□□ -1.31
TTR-203ENST00000541025 FKBP9O95302 570 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 GLP2RO95838 553 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 HARSP12081 509 aaKnown RBP6.86□□□□□ -1.31
TTR-203ENST00000541025 CPEP16870 476 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 CASP5P51878 434 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 IL2P60568 153 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 OSTNP61366 133 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 KRT85P78386 507 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 DSC1Q08554 894 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 HYAL1Q12794 435 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 SPIDRQ14159 915 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 DHCR24Q15392 516 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 NAB2Q15742 525 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 PLPP4Q5VZY2 271 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 HTR3DQ70Z44 454 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 FKBP9P1Q75LS8 142 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 COLGALT2Q8IYK4 626 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 GRAMD1CQ8IYS0 662 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 AFAP1L2Q8N4X5 818 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 SLC17A8Q8NDX2 589 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 PPP1R14CQ8TAE6 165 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 URGCPQ8TCY9 931 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 MRPS27Q92552 414 aaKnown RBP6.86□□□□□ -1.31
TTR-203ENST00000541025 HPS3Q969F9 1004 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 ARL8AQ96BM9 186 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 CLIP3Q96DZ5 547 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 IGSF21Q96ID5 467 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 ZNF512Q96ME7 567 aaPredicted RBP6.86□□□□□ -1.31
TTR-203ENST00000541025 MNTQ99583 582 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 ADPGKQ9BRR6 497 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 STRA6Q9BX79 667 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 KRTAP17-1Q9BYP8 105 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 LMAN2LQ9H0V9 348 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 ZMAT4Q9H898 229 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 UBN1Q9NPG3 1134 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 SLC2A4RGQ9NR83 387 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 MARCH5Q9NX47 278 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 SPG21Q9NZD8 308 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 TBC1D7Q9P0N9 293 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 LARSQ9P2J5 1176 aaKnown RBP6.86□□□□□ -1.31
TTR-203ENST00000541025 ANKFY1Q9P2R3 1169 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 THEGQ9P2T0 379 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 MCM8Q9UJA3 840 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 TBX20Q9UMR3 447 aa6.86□□□□□ -1.31
TTR-203ENST00000541025 ZMYM2Q9UBW7 1377 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 A0A087X1B8 175 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.85□□□□□ -1.31
TTR-203ENST00000541025 A0A1B0GVL5 298 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 HIDE1A8MVS5 230 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 ANKRD63C9JTQ0 380 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 NEMP1O14524 444 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 PER2O15055 1255 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 FAM189A1O60320 539 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 TBX10O75333 385 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 TOM1L1O75674 476 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 MYBP10242 640 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 IDEP14735 1019 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 PFKFB1P16118 471 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 BPIP17213 487 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 PPM1AP35813 382 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 TNFSF9P41273 254 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 OR1G1P47890 313 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 ID4P47928 161 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 LSSP48449 732 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 ALDH7A1P49419 539 aaKnown RBP6.85□□□□□ -1.31
TTR-203ENST00000541025 SLC25A3Q00325 362 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 GTF2BQ00403 316 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 UBE3AQ05086 875 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 GRIK3Q13003 919 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 STRN3Q13033 797 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 SMN1Q16637 294 aaKnown RBP6.85□□□□□ -1.31
TTR-203ENST00000541025 DCAF4L1Q3SXM0 396 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 GLRA4Q5JXX5 417 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 ZBTB41Q5SVQ8 909 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 UNQ6494/PRO21346Q6UXR6 183 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 TAS1R1Q7RTX1 841 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 ZNF720Q7Z2F6 126 aa6.85□□□□□ -1.31
TTR-203ENST00000541025 RBM23Q86U06 439 aaKnown RBP6.85□□□□□ -1.31
TTR-203ENST00000541025 HACE1Q8IYU2 909 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms