RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 GOLGA7BQ2TAP0 167 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 PPP1R15BQ5SWA1 713 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 STXBP5Q5T5C0 1151 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 ARHGAP40Q5TG30 622 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 PEAR1Q5VY43 1037 aaPredicted RBP8.67□□□□□ -1.02
CHD4-208ENST00000540960 DRICH1Q6PGQ1 229 aaPredicted RBP8.67□□□□□ -1.02
CHD4-208ENST00000540960 PSTKQ8IV42 348 aaKnown RBP8.67□□□□□ -1.02
CHD4-208ENST00000540960 MREGQ8N565 214 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 CCDC89Q8N998 374 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 GSTCDQ8NEC7 633 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 ATL2Q8NHH9 583 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 SEC14L1Q92503 715 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 MED8Q96G25 268 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 ZMAT2Q96NC0 199 aaKnown RBP8.67□□□□□ -1.02
CHD4-208ENST00000540960 MCEEQ96PE7 176 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 PNKPQ96T60 521 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 FERMT1Q9BQL6 677 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 ERP44Q9BS26 406 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 MAK16Q9BXY0 300 aaKnown RBP8.67□□□□□ -1.02
CHD4-208ENST00000540960 SLC4A5Q9BY07 1137 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 FUT8Q9BYC5 575 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 SDCBP2Q9H190 292 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 CPNE5Q9HCH3 593 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 ST7Q9NRC1 585 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 TUBGCP4Q9UGJ1 667 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 TSPAN16Q9UKR8 245 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 HES2Q9Y543 173 aa8.67□□□□□ -1.02
CHD4-208ENST00000540960 TCRBV5S1A1TA0A578 114 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 XPO1O14980 1071 aaKnown RBP8.66□□□□□ -1.02
CHD4-208ENST00000540960 ATMINO43313 823 aaPredicted RBP8.66□□□□□ -1.02
CHD4-208ENST00000540960 PRPSAP2O60256 369 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 PYGMP11217 842 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 MYL4P12829 197 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 HLA-EP13747 358 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 ZFXP17010 805 aaPredicted RBP8.66□□□□□ -1.02
CHD4-208ENST00000540960 ITIH2P19823 946 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 TYMPP19971 482 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 PLA2G4AP47712 749 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 RPL34P49207 117 aaKnown RBP8.66□□□□□ -1.02
CHD4-208ENST00000540960 AIF1P55008 147 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 EIF3BP55884 814 aaKnown RBP8.66□□□□□ -1.02
CHD4-208ENST00000540960 CLDN6P56747 220 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 TSPY1Q01534 308 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 SLC6A3Q01959 620 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 RHDQ02161 417 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 GRSF1Q12849 480 aaKnown RBP eCLIP8.66□□□□□ -1.02
CHD4-208ENST00000540960 ELAVL2Q12926 359 aaKnown RBP8.66□□□□□ -1.02
CHD4-208ENST00000540960 SLMAPQ14BN4 828 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 PPP1R7Q15435 360 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 C2orf27AQ580R0 203 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 TFDP3Q5H9I0 405 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 FAM102AQ5T9C2 384 aaPredicted RBP8.66□□□□□ -1.02
CHD4-208ENST00000540960 LYSMD4Q5XG99 296 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 OR6B2Q6IFH4 312 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 ANO7Q6IWH7 933 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 C4orf22Q6V702 233 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 PDZD4Q76G19 769 aaPredicted RBP8.66□□□□□ -1.02
CHD4-208ENST00000540960 BZW1Q7L1Q6 419 aaKnown RBP8.66□□□□□ -1.02
CHD4-208ENST00000540960 LPCAT2Q7L5N7 544 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 ACOT1Q86TX2 421 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 C11orf74Q86VG3 221 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 RASSF3Q86WH2 238 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 XYLT1Q86Y38 959 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 SPACA3Q8IXA5 215 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 WDTC1Q8N5D0 677 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 B3GALNT2Q8NCR0 500 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 MDGA1Q8NFP4 955 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 AENQ8WTP8 325 aaKnown RBP8.66□□□□□ -1.02
CHD4-208ENST00000540960 SLC35F5Q8WV83 523 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 TEKT4Q8WW24 435 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 IFT81Q8WYA0 676 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 KCTD13Q8WZ19 329 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 ALG3Q92685 438 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 HAUS1Q96CS2 278 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 PSMG3-AS1Q96PY0 264 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 AP1M1Q9BXS5 423 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 DUSP16Q9BY84 665 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 OSBPL8Q9BZF1 889 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 KLK14Q9P0G3 267 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 STAP1Q9ULZ2 295 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 DRG1Q9Y295 367 aaKnown RBP8.66□□□□□ -1.02
CHD4-208ENST00000540960 CDY1Q9Y6F8 540 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 BOD1L1Q8NFC6 3051 aa8.66□□□□□ -1.02
CHD4-208ENST00000540960 PLXND1Q9Y4D7 1925 aa8.65□□□□□ -1.02
CHD4-208ENST00000540960 GOLGA6BA6NDN3 693 aa8.65□□□□□ -1.02
CHD4-208ENST00000540960 GOLGA8SH3BPF8 625 aa8.65□□□□□ -1.02
CHD4-208ENST00000540960 TMEM189-UBE2V1I3L0A0 370 aa8.65□□□□□ -1.02
CHD4-208ENST00000540960 ZNF197O14709 1029 aa8.65□□□□□ -1.02
CHD4-208ENST00000540960 TRDMT1O14717 391 aaKnown RBP8.65□□□□□ -1.02
CHD4-208ENST00000540960 GABRDO14764 452 aa8.65□□□□□ -1.02
CHD4-208ENST00000540960 RAD51CO43502 376 aa8.65□□□□□ -1.02
CHD4-208ENST00000540960 SEC24AO95486 1093 aa8.65□□□□□ -1.02
CHD4-208ENST00000540960 F9P00740 461 aa8.65□□□□□ -1.02
CHD4-208ENST00000540960 LRG1P02750 347 aa8.65□□□□□ -1.02
CHD4-208ENST00000540960 KRT1P04264 644 aa8.65□□□□□ -1.02
CHD4-208ENST00000540960 CYP11A1P05108 521 aa8.65□□□□□ -1.02
CHD4-208ENST00000540960 FAM200BP0CF97 657 aa8.65□□□□□ -1.02
CHD4-208ENST00000540960 HNRNPLP14866 589 aaKnown RBP eCLIP8.65□□□□□ -1.02
CHD4-208ENST00000540960 PDGFRAP16234 1089 aa8.65□□□□□ -1.02
CHD4-208ENST00000540960 PTPN1P18031 435 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms