RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 PAK1Q13153 545 aa16.77■□□□□ 0.28
TRIM65-203ENST00000540812 SHBQ15464 509 aa16.77■□□□□ 0.28
TRIM65-203ENST00000540812 RNF219Q5W0B1 726 aaPredicted RBP16.77■□□□□ 0.28
TRIM65-203ENST00000540812 GATAD2AQ86YP4 633 aa16.77■□□□□ 0.28
TRIM65-203ENST00000540812 BTN2A3PQ96KV6 586 aa16.77■□□□□ 0.28
TRIM65-203ENST00000540812 PRMT1Q99873 361 aaKnown RBP16.77■□□□□ 0.28
TRIM65-203ENST00000540812 CRACR2AQ9BSW2 395 aa16.77■□□□□ 0.28
TRIM65-203ENST00000540812 FZD4Q9ULV1 537 aa16.77■□□□□ 0.28
TRIM65-203ENST00000540812 URB1O60287 2271 aaKnown RBP16.77■□□□□ 0.27
TRIM65-203ENST00000540812 KNTC1P50748 2209 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 SYNJ2BP-COX16A0A087WUM0 186 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 A0A1W2PR77 199 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 BECN2A8MW95 431 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 KCNU1A8MYU2 1149 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 F5H5T6 163 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 PLK4O00444 970 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 MED7O43513 233 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 GADD45BO75293 160 aaPredicted RBP16.76■□□□□ 0.27
TRIM65-203ENST00000540812 GOT1P17174 413 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 CCR5P51681 352 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 METAP1P53582 386 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 YWHAZP63104 245 aaKnown RBP16.76■□□□□ 0.27
TRIM65-203ENST00000540812 APBA1Q02410 837 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 SFSWAPQ12872 951 aaKnown RBP16.76■□□□□ 0.27
TRIM65-203ENST00000540812 PDCLQ13371 301 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 CAMK2BQ13554 666 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 SMAD1Q15797 465 aaKnown RBP16.76■□□□□ 0.27
TRIM65-203ENST00000540812 MEA1Q16626 185 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 COL28A1Q2UY09 1125 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 DHRS13Q6UX07 377 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 SND1Q7KZF4 910 aaKnown RBP eCLIP16.76■□□□□ 0.27
TRIM65-203ENST00000540812 CCAR2Q8N163 923 aaKnown RBP16.76■□□□□ 0.27
TRIM65-203ENST00000540812 OR14C36Q8NHC7 312 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 MED15Q96RN5 788 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 ELF4Q99607 663 aaPredicted RBP16.76■□□□□ 0.27
TRIM65-203ENST00000540812 TRIM62Q9BVG3 475 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 THAP9Q9H5L6 903 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 FAM204AQ9H8W3 233 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 AASDHPPTQ9NRN7 309 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 COX16Q9P0S2 106 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 FTSJ1Q9UET6 329 aa16.76■□□□□ 0.27
TRIM65-203ENST00000540812 IGSF10Q6WRI0 2623 aa16.75■□□□□ 0.27
TRIM65-203ENST00000540812 TRABD2BA6NFA1 517 aa16.75■□□□□ 0.27
TRIM65-203ENST00000540812 CBX4O00257 560 aa16.75■□□□□ 0.27
TRIM65-203ENST00000540812 IL1BP01584 269 aa16.75■□□□□ 0.27
TRIM65-203ENST00000540812 C5AR1P21730 350 aa16.75■□□□□ 0.27
TRIM65-203ENST00000540812 CD38P28907 300 aa16.75■□□□□ 0.27
TRIM65-203ENST00000540812 PPP2CBP62714 309 aa16.75■□□□□ 0.27
TRIM65-203ENST00000540812 PPP2CAP67775 309 aa16.75■□□□□ 0.27
TRIM65-203ENST00000540812 CYP4F3Q08477 520 aa16.75■□□□□ 0.27
TRIM65-203ENST00000540812 CXorf57Q6NSI4 855 aaKnown RBP16.75■□□□□ 0.27
TRIM65-203ENST00000540812 DEFB106AQ8N104 65 aa16.75■□□□□ 0.27
TRIM65-203ENST00000540812 GALNT15Q8N3T1 639 aa16.75■□□□□ 0.27
TRIM65-203ENST00000540812 WDTC1Q8N5D0 677 aa16.75■□□□□ 0.27
TRIM65-203ENST00000540812 ATP6V0D2Q8N8Y2 350 aa16.75■□□□□ 0.27
TRIM65-203ENST00000540812 FRS2Q8WU20 508 aa16.75■□□□□ 0.27
TRIM65-203ENST00000540812 TP53BP1Q12888 1972 aaPredicted RBP16.75■□□□□ 0.27
TRIM65-203ENST00000540812 DFNA5O60443 496 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 GRAP2O75791 330 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 ADH1BP00325 375 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 SLC9A1P19634 815 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 DRD3P35462 400 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 IRAK1P51617 712 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 CLDN6P56747 220 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 CENPCQ03188 943 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 ELAVL3Q14576 367 aaKnown RBP16.74■□□□□ 0.27
TRIM65-203ENST00000540812 ARHGAP44Q17R89 818 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 INAVAQ3KP66 663 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 TRIM65Q6PJ69 517 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.74■□□□□ 0.27
TRIM65-203ENST00000540812 ENOSF1Q7L5Y1 443 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 PDZD3Q86UT5 571 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 PASD1Q8IV76 773 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 SAP25Q8TEE9 199 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 HNRNPLLQ8WVV9 542 aaKnown RBP16.74■□□□□ 0.27
TRIM65-203ENST00000540812 SERAC1Q96JX3 654 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 SLC2A13Q96QE2 648 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 CPXM1Q96SM3 734 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.74■□□□□ 0.27
TRIM65-203ENST00000540812 DDIT4Q9NX09 232 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 DKK4Q9UBT3 224 aa16.74■□□□□ 0.27
TRIM65-203ENST00000540812 GGCXP38435 758 aa16.73■□□□□ 0.27
TRIM65-203ENST00000540812 USP8P40818 1118 aa16.73■□□□□ 0.27
TRIM65-203ENST00000540812 PLK1P53350 603 aa16.73■□□□□ 0.27
TRIM65-203ENST00000540812 CDK17Q00537 523 aa16.73■□□□□ 0.27
TRIM65-203ENST00000540812 DNAJC3Q13217 504 aa16.73■□□□□ 0.27
TRIM65-203ENST00000540812 SLC12A1Q13621 1099 aa16.73■□□□□ 0.27
TRIM65-203ENST00000540812 FBXL22Q6P050 247 aa16.73■□□□□ 0.27
TRIM65-203ENST00000540812 OR52K2Q8NGK3 314 aa16.73■□□□□ 0.27
TRIM65-203ENST00000540812 SKA1Q96BD8 255 aa16.73■□□□□ 0.27
TRIM65-203ENST00000540812 ALG14Q96F25 216 aa16.73■□□□□ 0.27
TRIM65-203ENST00000540812 PPP1R13BQ96KQ4 1090 aa16.73■□□□□ 0.27
TRIM65-203ENST00000540812 GDF3Q9NR23 364 aa16.73■□□□□ 0.27
TRIM65-203ENST00000540812 SLC12A6Q9UHW9 1150 aa16.73■□□□□ 0.27
TRIM65-203ENST00000540812 AJAP1Q9UKB5 411 aaPredicted RBP16.73■□□□□ 0.27
TRIM65-203ENST00000540812 SARDHQ9UL12 918 aa16.73■□□□□ 0.27
TRIM65-203ENST00000540812 NYNRINQ9P2P1 1898 aaKnown RBP16.73■□□□□ 0.27
TRIM65-203ENST00000540812 ASXL3Q9C0F0 2248 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 A0A1B0GVM2 712 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 TCAF2A6NFQ2 919 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms