RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 DQX1Q8TE96 717 aaKnown RBP7.56□□□□□ -1.2
YBX3-209ENST00000540747 CLEC4CQ8WTT0 213 aa7.56□□□□□ -1.2
YBX3-209ENST00000540747 SNRNP27Q8WVK2 155 aaKnown RBP7.56□□□□□ -1.2
YBX3-209ENST00000540747 FOXD4L4Q8WXT5 416 aaPredicted RBP7.56□□□□□ -1.2
YBX3-209ENST00000540747 BAP1Q92560 729 aa7.56□□□□□ -1.2
YBX3-209ENST00000540747 SNX21Q969T3 373 aa7.56□□□□□ -1.2
YBX3-209ENST00000540747 SKA1Q96BD8 255 aa7.56□□□□□ -1.2
YBX3-209ENST00000540747 WBP1Q96G27 269 aa7.56□□□□□ -1.2
YBX3-209ENST00000540747 SERAC1Q96JX3 654 aa7.56□□□□□ -1.2
YBX3-209ENST00000540747 AASDHPPTQ9NRN7 309 aa7.56□□□□□ -1.2
YBX3-209ENST00000540747 HESX1Q9UBX0 185 aa7.56□□□□□ -1.2
YBX3-209ENST00000540747 CYTH4Q9UIA0 394 aa7.56□□□□□ -1.2
YBX3-209ENST00000540747 XPO7Q9UIA9 1087 aaKnown RBP7.56□□□□□ -1.2
YBX3-209ENST00000540747 KIAA1257Q9ULG3 409 aa7.56□□□□□ -1.2
YBX3-209ENST00000540747 MAPK8IP1Q9UQF2 711 aa7.56□□□□□ -1.2
YBX3-209ENST00000540747 TLR6Q9Y2C9 796 aa7.56□□□□□ -1.2
YBX3-209ENST00000540747 BSNQ9UPA5 3926 aa7.56□□□□□ -1.2
YBX3-209ENST00000540747 LY6G6EA0A0G2JKS1 128 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 ERVH48-1M5A8F1 160 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 PMM2O15305 246 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 SLC16A3O15427 465 aaKnown RBP7.55□□□□□ -1.2
YBX3-209ENST00000540747 RRP8O43159 456 aaKnown RBP7.55□□□□□ -1.2
YBX3-209ENST00000540747 SLC7A4O43246 635 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 PLRG1O43660 514 aaKnown RBP7.55□□□□□ -1.2
YBX3-209ENST00000540747 SIGLEC6O43699 453 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 STX10O60499 249 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 LCP1P13796 627 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 VAV1P15498 845 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 GLDCP23378 1020 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 ACTN2P35609 894 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 NUDT1P36639 197 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 PSMD8P48556 350 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 RGS7P49802 495 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 STK19P49842 368 aaPredicted RBP7.55□□□□□ -1.2
YBX3-209ENST00000540747 NDUFA8P51970 172 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 PLK1P53350 603 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 ST8SIA6P61647 398 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 ECT2LQ008S8 904 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 ZNF211Q13398 564 aaPredicted RBP7.55□□□□□ -1.2
YBX3-209ENST00000540747 CNGA2Q16280 664 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 FOXD4L6Q3SYB3 417 aaPredicted RBP7.55□□□□□ -1.2
YBX3-209ENST00000540747 COBLL1Q53SF7 1204 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 AGBL4Q5VU57 503 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 FOXD4L3Q6VB84 417 aaPredicted RBP7.55□□□□□ -1.2
YBX3-209ENST00000540747 LRRC69Q6ZNQ3 347 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 TAC4Q86UU9 113 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 APCDD1Q8J025 514 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 SLC25A45Q8N413 288 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 OR14C36Q8NHC7 312 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 GANCQ8TET4 914 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 SLC35C1Q96A29 364 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 ALG14Q96F25 216 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 HSFY1Q96LI6 401 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 PRMT1Q99873 361 aaKnown RBP7.55□□□□□ -1.2
YBX3-209ENST00000540747 OMDQ99983 421 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 KDM4CQ9H3R0 1056 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 STIM2Q9P246 746 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 SARDHQ9UL12 918 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 CFAP45Q9UL16 551 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 CLCA2Q9UQC9 943 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 DMTF1Q9Y222 760 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 PCDHB1Q9Y5F3 818 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 AK5Q9Y6K8 562 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 U3KQA8 63 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 AHCTF1Q8WYP5 2266 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 COL27A1Q8IZC6 1860 aaPredicted RBP7.55□□□□□ -1.2
YBX3-209ENST00000540747 COL12A1Q99715 3063 aa7.55□□□□□ -1.2
YBX3-209ENST00000540747 LRRK2Q5S007 2527 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 A0A1W2PNU3 283 aaPredicted RBP7.54□□□□□ -1.2
YBX3-209ENST00000540747 RNF225M0QZC1 329 aaPredicted RBP7.54□□□□□ -1.2
YBX3-209ENST00000540747 ATP9BO43861 1147 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 RTN2O75298 545 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 FBXO21O94952 628 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 MT-CO3P00414 261 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 EPB41P11171 864 aaKnown RBP7.54□□□□□ -1.2
YBX3-209ENST00000540747 CD19P15391 556 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 TBXAS1P24557 533 aaPredicted RBP7.54□□□□□ -1.2
YBX3-209ENST00000540747 TAS2R38P59533 333 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 YWHAEP62258 255 aaKnown RBP7.54□□□□□ -1.2
YBX3-209ENST00000540747 SKOR1P84550 965 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 CFHR1Q03591 330 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 CDH18Q13634 790 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 SLC45A4Q5BKX6 768 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 CXorf57Q6NSI4 855 aaKnown RBP7.54□□□□□ -1.2
YBX3-209ENST00000540747 IGF2-ASQ6U949 168 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 KRBA2Q6ZNG9 492 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 ZNF605Q86T29 641 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 SMYD4Q8IYR2 804 aaPredicted RBP7.54□□□□□ -1.2
YBX3-209ENST00000540747 CFAP52Q8N1V2 620 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 CARNMT1Q8N4J0 409 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 OR4C6Q8NH72 309 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 LMO3Q8TAP4 145 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 TTC9Q92623 222 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 KAT5Q92993 513 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 RPL10LQ96L21 214 aaKnown RBP7.54□□□□□ -1.2
YBX3-209ENST00000540747 SERPINB11Q96P15 392 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 SPAG5Q96R06 1193 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 DDX50Q9BQ39 737 aaKnown RBP7.54□□□□□ -1.2
YBX3-209ENST00000540747 SEMA4CQ9C0C4 833 aa7.54□□□□□ -1.2
YBX3-209ENST00000540747 GOLPH3LQ9H4A5 285 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms