RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 FOXD2O60548 495 aaPredicted RBP17.21■□□□□ 0.35
UBC-208ENST00000540700 PALMO75781 387 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 LRIG2O94898 1065 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 CD48P09326 243 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 TYRP14679 529 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 CHKAP35790 457 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 GJC1P36383 396 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 OPRD1P41143 372 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 NRG1Q02297 640 aaPredicted RBP17.21■□□□□ 0.35
UBC-208ENST00000540700 ANO4Q32M45 955 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 ALFQ53S48 1182 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 ERMARDQ5T6L9 678 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 ANKS1BQ7Z6G8 1248 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 C17orf53Q8N3J3 647 aaPredicted RBP17.21■□□□□ 0.35
UBC-208ENST00000540700 CPA6Q8N4T0 437 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 NAT16Q8N8M0 369 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 C12orf50Q8NA57 414 aaPredicted RBP17.21■□□□□ 0.35
UBC-208ENST00000540700 HSPH1Q92598 858 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 KRT35Q92764 455 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 BBS2Q9BXC9 721 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 ARRDC1-AS1Q9H2J1 176 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 FBRSL1Q9HCM7 1045 aaKnown RBP17.21■□□□□ 0.35
UBC-208ENST00000540700 RXFP3Q9NSD7 469 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 TRMT1Q9NXH9 659 aaKnown RBP17.21■□□□□ 0.35
UBC-208ENST00000540700 ZNF212Q9UDV6 495 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 DRGXA6NNA5 263 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 F5H5T6 163 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 SPECC1L-ADORA2AF8WAN1 911 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 TBL1XO60907 577 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 SRGAP2O75044 1071 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 L1CAMP32004 1257 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 CTHP32929 405 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 SSR1P43307 286 aaKnown RBP17.2■□□□□ 0.34
UBC-208ENST00000540700 NAP1L1P55209 391 aaKnown RBP17.2■□□□□ 0.34
UBC-208ENST00000540700 GAD2Q05329 585 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 COL9A2Q14055 689 aaPredicted RBP17.2■□□□□ 0.34
UBC-208ENST00000540700 ARL13BQ3SXY8 428 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 EFHC2Q5JST6 749 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 DAAM2Q86T65 1068 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 PHTF2Q8N3S3 785 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 OR52K2Q8NGK3 314 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 DDI1Q8WTU0 396 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 TMA16Q96EY4 203 aaKnown RBP17.2■□□□□ 0.34
UBC-208ENST00000540700 LMLNQ96KR4 655 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 TSGA10Q9BZW7 698 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 DHX35Q9H5Z1 703 aaKnown RBP17.2■□□□□ 0.34
UBC-208ENST00000540700 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.2■□□□□ 0.34
UBC-208ENST00000540700 TMEM51Q9NW97 253 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.2■□□□□ 0.34
UBC-208ENST00000540700 MPP6Q9NZW5 540 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 STIM2Q9P246 746 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 OR12D3Q9UGF7 316 aa17.2■□□□□ 0.34
UBC-208ENST00000540700 MYOFQ9NZM1 2061 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 FTCDO95954 541 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 ADH1CP00326 375 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 CISD3P0C7P0 127 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 TNNT1P13805 278 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 IL4RP24394 825 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 SLC1A1P43005 524 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 AIF1P55008 147 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 DPYSL2Q16555 572 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 MPPE1Q53F39 396 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 FSCBQ5H9T9 825 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 NT5DC3Q86UY8 548 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 NLRP14Q86W24 1093 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 RNF10Q8N5U6 811 aaKnown RBP17.19■□□□□ 0.34
UBC-208ENST00000540700 FAM71BQ8TC56 605 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 TEKT4Q8WW24 435 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 RAPGEF5Q92565 580 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 TSC1Q92574 1164 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 EZH1Q92800 747 aaPredicted RBP17.19■□□□□ 0.34
UBC-208ENST00000540700 RPRD1AQ96P16 312 aaPredicted RBP17.19■□□□□ 0.34
UBC-208ENST00000540700 PCDH18Q9HCL0 1135 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 NDFIP2Q9NV92 336 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 LCMT1Q9UIC8 334 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 FBXO10Q9UK96 956 aa17.19■□□□□ 0.34
UBC-208ENST00000540700 PACSIN2Q9UNF0 486 aaPredicted RBP17.19■□□□□ 0.34
UBC-208ENST00000540700 FASNP49327 2511 aaKnown RBP17.19■□□□□ 0.34
UBC-208ENST00000540700 KRT86O43790 486 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 SPOPO43791 374 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 CREB3O43889 395 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 CACNG3O60359 315 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 TULP3O75386 442 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 GOT1P17174 413 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 DESP17661 470 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 PXNP49023 591 aaPredicted RBP17.18■□□□□ 0.34
UBC-208ENST00000540700 SHC2P98077 582 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 MMRN1Q13201 1228 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 BOLA3Q53S33 107 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 STPG1Q5TH74 334 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 CXorf57Q6NSI4 855 aaKnown RBP17.18■□□□□ 0.34
UBC-208ENST00000540700 PSTKQ8IV42 348 aaKnown RBP17.18■□□□□ 0.34
UBC-208ENST00000540700 CCAR2Q8N163 923 aaKnown RBP17.18■□□□□ 0.34
UBC-208ENST00000540700 TXLNBQ8N3L3 684 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 HJURPQ8NCD3 748 aaPredicted RBP17.18■□□□□ 0.34
UBC-208ENST00000540700 NCAPGQ9BPX3 1015 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 DDX50Q9BQ39 737 aaKnown RBP17.18■□□□□ 0.34
UBC-208ENST00000540700 SMOC1Q9H4F8 434 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 C8orf33Q9H7E9 229 aaPredicted RBP17.18■□□□□ 0.34
UBC-208ENST00000540700 CWC15Q9P013 229 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms