RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 LRRC40Q9H9A6 602 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 CITO14578 2027 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 SCN1AP35498 2009 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 KPNA7A9QM74 516 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 E9PBE3 544 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 KLHL41O60662 606 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 TRIM13O60858 407 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 H2AFYO75367 372 aaKnown RBP12.57□□□□□ -0.4
NPC1-202ENST00000540608 ZNF286BP0CG31 522 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 THRAP10827 490 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 CHN2P52757 468 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 FOLH1Q04609 750 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 FRG1Q14331 258 aaKnown RBP12.57□□□□□ -0.4
NPC1-202ENST00000540608 UGT2A3Q6UWM9 527 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 CLEC14AQ86T13 490 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 TDRD5Q8NAT2 981 aaKnown RBP12.57□□□□□ -0.4
NPC1-202ENST00000540608 NETO2Q8NC67 525 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 RNF139Q8WU17 664 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 LENG8Q96PV6 779 aaPredicted RBP12.57□□□□□ -0.4
NPC1-202ENST00000540608 PRDM12Q9H4Q4 367 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 C6orf203Q9P0P8 240 aaPredicted RBP12.57□□□□□ -0.4
NPC1-202ENST00000540608 MYO18AQ92614 2054 aaKnown RBP12.56□□□□□ -0.4
NPC1-202ENST00000540608 A0A096LPK6 155 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 CXCL11O14625 94 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 GRIA2P42262 883 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 ALDH1A3P47895 512 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 SULT1E1P49888 294 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 PAFAH1B3Q15102 231 aaKnown RBP12.56□□□□□ -0.4
NPC1-202ENST00000540608 ARMCX2Q7L311 632 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 PID1Q7Z2X4 250 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 TMEM135Q86UB9 458 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 DEFB106AQ8N104 65 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
NPC1-202ENST00000540608 OR52K1Q8NGK4 314 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 MAPK15Q8TD08 544 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 TCF7L2Q9NQB0 619 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 STK39Q9UEW8 545 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 PRPF19Q9UMS4 504 aaKnown RBP12.56□□□□□ -0.4
NPC1-202ENST00000540608 PSMD13Q9UNM6 376 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 INPP5FQ9Y2H2 1132 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 PLXNA1Q9UIW2 1896 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 DENRO43583 198 aaKnown RBP12.56□□□□□ -0.4
NPC1-202ENST00000540608 HCRTO43612 131 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 PDGFRBP09619 1106 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 DCAF4L1Q3SXM0 396 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 CNDP1Q96KN2 507 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 OR52B2Q96RD2 323 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 ILKAPQ9H0C8 392 aaPredicted RBP12.56□□□□□ -0.4
NPC1-202ENST00000540608 NDUFA13Q9P0J0 144 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 TUBGCP4Q9UGJ1 667 aa12.56□□□□□ -0.4
NPC1-202ENST00000540608 SMIM31A0A1B0GVY4 71 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 RGSL1A5PLK6 1076 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.55□□□□□ -0.4
NPC1-202ENST00000540608 GNL1P36915 607 aaPredicted RBP12.55□□□□□ -0.4
NPC1-202ENST00000540608 LSAMPQ13449 338 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 LAMC2Q13753 1193 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 GRAMD1BQ3KR37 738 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 FBXL19Q6PCT2 694 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 C16orf89Q6UX73 402 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 MAMDC4Q6UXC1 1216 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 PQLC1Q8N2U9 271 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 BEST2Q8NFU1 509 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 URGCPQ8TCY9 931 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 NAT14Q8WUY8 206 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 ZNF669Q96BR6 464 aaPredicted RBP12.55□□□□□ -0.4
NPC1-202ENST00000540608 AGAP2Q99490 1192 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 SERPINI1Q99574 410 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 NMRAL1Q9HBL8 299 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 SNTG2Q9NY99 539 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 BFARQ9NZS9 450 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 KCNH4Q9UQ05 1017 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 DTNAQ9Y4J8 743 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 ZCWPW2A0A1B0GU75 182 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 FBXO21O94952 628 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 C9orf57Q5W0N0 161 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 TAPT1Q6NXT6 567 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 ANKRD13AQ8IZ07 590 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 MARVELD2Q8N4S9 558 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 SLC7A14Q8TBB6 771 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 C18orf25Q96B23 403 aaPredicted RBP12.55□□□□□ -0.4
NPC1-202ENST00000540608 ATXN7L3BQ96GX2 97 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 SNX27Q96L92 541 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 GATA5Q9BWX5 397 aaPredicted RBP12.55□□□□□ -0.4
NPC1-202ENST00000540608 EPB41L1Q9H4G0 881 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 MROH8Q9H579 483 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 ADARB2Q9NS39 739 aaKnown RBP12.55□□□□□ -0.4
NPC1-202ENST00000540608 OXSMQ9NWU1 459 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 VPS28Q9UK41 221 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 VANGL2Q9ULK5 521 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 COL1A2P08123 1366 aa12.55□□□□□ -0.4
NPC1-202ENST00000540608 MATN2O00339 956 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 TXNDC9O14530 226 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 AIM2O14862 343 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 CREB3O43889 395 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 ZNF189O75820 626 aaPredicted RBP12.54□□□□□ -0.4
NPC1-202ENST00000540608 AP2A1O95782 977 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 C2P06681 752 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 LMO2P25791 158 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 PIK3R1P27986 724 aa12.54□□□□□ -0.4
NPC1-202ENST00000540608 SERPINB5P36952 375 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms