RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 FAM72DQ6L9T8 149 aa16.28■□□□□ 0.2
CACFD1-206ENST00000540581 FAM72BQ86X60 149 aa16.28■□□□□ 0.2
CACFD1-206ENST00000540581 ZSCAN18Q8TBC5 510 aaPredicted RBP16.28■□□□□ 0.2
CACFD1-206ENST00000540581 TMA16Q96EY4 203 aaKnown RBP16.28■□□□□ 0.2
CACFD1-206ENST00000540581 TASP1Q9H6P5 420 aa16.28■□□□□ 0.2
CACFD1-206ENST00000540581 TCF7L2Q9NQB0 619 aa16.28■□□□□ 0.2
CACFD1-206ENST00000540581 C20orf96Q9NUD7 363 aaPredicted RBP16.28■□□□□ 0.2
CACFD1-206ENST00000540581 MORF4L1Q9UBU8 362 aa16.28■□□□□ 0.2
CACFD1-206ENST00000540581 RTN3O95197 1032 aaPredicted RBP16.27■□□□□ 0.2
CACFD1-206ENST00000540581 ZFXP17010 805 aaPredicted RBP16.27■□□□□ 0.2
CACFD1-206ENST00000540581 NELFEP18615 380 aaKnown RBP16.27■□□□□ 0.2
CACFD1-206ENST00000540581 GRK2P25098 689 aa16.27■□□□□ 0.2
CACFD1-206ENST00000540581 RPS12P25398 132 aaKnown RBP16.27■□□□□ 0.2
CACFD1-206ENST00000540581 CNTFP26441 200 aa16.27■□□□□ 0.2
CACFD1-206ENST00000540581 PMLP29590 882 aa16.27■□□□□ 0.2
CACFD1-206ENST00000540581 GARSP41250 739 aaKnown RBP16.27■□□□□ 0.2
CACFD1-206ENST00000540581 TLR1Q15399 786 aa16.27■□□□□ 0.2
CACFD1-206ENST00000540581 PGM2L1Q6PCE3 622 aa16.27■□□□□ 0.2
CACFD1-206ENST00000540581 AAGABQ6PD74 315 aa16.27■□□□□ 0.2
CACFD1-206ENST00000540581 HFE2Q6ZVN8 426 aa16.27■□□□□ 0.2
CACFD1-206ENST00000540581 APLFQ8IW19 511 aaPredicted RBP16.27■□□□□ 0.2
CACFD1-206ENST00000540581 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.27■□□□□ 0.21e-7■□□□□ 9
CACFD1-206ENST00000540581 RCN3Q96D15 328 aa16.27■□□□□ 0.2
CACFD1-206ENST00000540581 OMDQ99983 421 aa16.27■□□□□ 0.2
CACFD1-206ENST00000540581 GATA5Q9BWX5 397 aaPredicted RBP16.27■□□□□ 0.2
CACFD1-206ENST00000540581 UBE2OQ9C0C9 1292 aaKnown RBP16.27■□□□□ 0.2
CACFD1-206ENST00000540581 CDH19Q9H159 772 aa16.27■□□□□ 0.2
CACFD1-206ENST00000540581 DNAJC28Q9NX36 388 aa16.27■□□□□ 0.2
CACFD1-206ENST00000540581 C15orf38-AP3S2A0A0A6YYH1 394 aa16.27■□□□□ 0.19
CACFD1-206ENST00000540581 H3BNX3 289 aa16.27■□□□□ 0.19
CACFD1-206ENST00000540581 BEST1O76090 585 aa16.27■□□□□ 0.19
CACFD1-206ENST00000540581 ALDH1A2O94788 518 aa16.27■□□□□ 0.19
CACFD1-206ENST00000540581 C2P06681 752 aa16.27■□□□□ 0.19
CACFD1-206ENST00000540581 XRCC1P18887 633 aaPredicted RBP16.27■□□□□ 0.19
CACFD1-206ENST00000540581 TKTP29401 623 aaKnown RBP16.27■□□□□ 0.19
CACFD1-206ENST00000540581 FDFT1P37268 417 aa16.27■□□□□ 0.19
CACFD1-206ENST00000540581 NR2C2P49116 596 aa16.27■□□□□ 0.19
CACFD1-206ENST00000540581 LAMB3Q13751 1172 aa16.27■□□□□ 0.19
CACFD1-206ENST00000540581 ARPINQ7Z6K5 226 aa16.27■□□□□ 0.19
CACFD1-206ENST00000540581 CCNYL1Q8N7R7 359 aa16.27■□□□□ 0.19
CACFD1-206ENST00000540581 PNPLA1Q8N8W4 532 aa16.27■□□□□ 0.19
CACFD1-206ENST00000540581 APBB2Q92870 758 aa16.27■□□□□ 0.19
CACFD1-206ENST00000540581 FAM192AQ9GZU8 254 aa16.27■□□□□ 0.19
CACFD1-206ENST00000540581 NXF3Q9H4D5 531 aaKnown RBP16.27■□□□□ 0.19
CACFD1-206ENST00000540581 DOCK1Q14185 1865 aa16.27■□□□□ 0.19
CACFD1-206ENST00000540581 TMEM233B4DJY2 109 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 IGFBP6P24592 240 aaPredicted RBP16.26■□□□□ 0.19
CACFD1-206ENST00000540581 GNL1P36915 607 aaPredicted RBP16.26■□□□□ 0.19
CACFD1-206ENST00000540581 THOP1P52888 689 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 NAGLUP54802 743 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 DEUP1Q05D60 604 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 TTLL12Q14166 644 aaPredicted RBP16.26■□□□□ 0.19
CACFD1-206ENST00000540581 NDNQ99608 321 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 VANGL2Q9ULK5 521 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 PTPRFP10586 1907 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 ADM5C9JUS6 153 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 SPTLC1O15269 473 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 CNGA3Q16281 694 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 STEAP4Q687X5 459 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 PIGZQ86VD9 579 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 APOBEC3FQ8IUX4 373 aaKnown RBP16.26■□□□□ 0.19
CACFD1-206ENST00000540581 RNF217Q8TC41 542 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 DCUN1D1Q96GG9 259 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 EPAS1Q99814 870 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 VRTNQ9H8Y1 702 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 CDHR5Q9HBB8 845 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 KIAA1257Q9ULG3 409 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 SORCS3Q9UPU3 1222 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 CSADQ9Y600 493 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 DNAH12Q6ZR08 3092 aa16.26■□□□□ 0.19
CACFD1-206ENST00000540581 EEF2KO00418 725 aaKnown RBP16.25■□□□□ 0.19
CACFD1-206ENST00000540581 PIGNO95427 931 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 PIK3R1P27986 724 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 BST2Q10589 180 aaKnown RBP16.25■□□□□ 0.19
CACFD1-206ENST00000540581 FLOT2Q14254 428 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 FSCBQ5H9T9 825 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 C6orf52Q5T4I8 152 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 SPATA24Q86W54 205 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.25■□□□□ 0.19
CACFD1-206ENST00000540581 URGCPQ8TCY9 931 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 ACMSDQ8TDX5 336 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 CELF6Q96J87 481 aaKnown RBP16.25■□□□□ 0.19
CACFD1-206ENST00000540581 LRGUKQ96M69 825 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 GRIP2Q9C0E4 1043 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 SNX25Q9H3E2 840 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 NMRAL1Q9HBL8 299 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 DDX18Q9NVP1 670 aaKnown RBP16.25■□□□□ 0.19
CACFD1-206ENST00000540581 CDY2AQ9Y6F7 541 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 CDY1Q9Y6F8 540 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 G3V2L1 256 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 ZBTB24O43167 697 aaPredicted RBP16.25■□□□□ 0.19
CACFD1-206ENST00000540581 PEX1O43933 1283 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 NUMBP49757 651 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 TTLL4Q14679 1199 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 LSM12Q3MHD2 195 aaKnown RBP16.25■□□□□ 0.19
CACFD1-206ENST00000540581 EPGNQ6UW88 154 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 SLC26A9Q7LBE3 791 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 CATSPER4Q7RTX7 472 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 TMC7Q7Z402 723 aa16.25■□□□□ 0.19
CACFD1-206ENST00000540581 EXOC8Q8IYI6 725 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms