RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 FOXC1Q12948 553 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 EIF4EBP2Q13542 120 aaPredicted RBP9.29□□□□□ -0.92
LMO3-222ENST00000540445 KRT31Q15323 416 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 ST3GAL2Q16842 350 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 HNRNPA1L2Q32P51 320 aaKnown RBP9.29□□□□□ -0.92
LMO3-222ENST00000540445 C2CD6Q53TS8 623 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 C9orf64Q5T6V5 341 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 TTC39BQ5VTQ0 682 aaPredicted RBP9.29□□□□□ -0.92
LMO3-222ENST00000540445 LRRC31Q6UY01 552 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 NOP9Q86U38 636 aaKnown RBP9.29□□□□□ -0.92
LMO3-222ENST00000540445 ZNF397Q8NF99 534 aaPredicted RBP9.29□□□□□ -0.92
LMO3-222ENST00000540445 IGSF8Q969P0 613 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 MYO19Q96H55 970 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 SPAG5Q96R06 1193 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 NPY6RQ99463 290 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 PRMT1Q99873 361 aaKnown RBP9.29□□□□□ -0.92
LMO3-222ENST00000540445 NAA15Q9BXJ9 866 aaKnown RBP9.29□□□□□ -0.92
LMO3-222ENST00000540445 TMEM121BQ9BXQ6 578 aaPredicted RBP9.29□□□□□ -0.92
LMO3-222ENST00000540445 TKTL2Q9H0I9 626 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 RSPH9Q9H1X1 276 aaPredicted RBP9.29□□□□□ -0.92
LMO3-222ENST00000540445 C6orf106Q9H6K1 298 aaPredicted RBP9.29□□□□□ -0.92
LMO3-222ENST00000540445 SGK2Q9HBY8 427 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 FAM207AQ9NSI2 230 aaPredicted RBP9.29□□□□□ -0.92
LMO3-222ENST00000540445 SCML1Q9UN30 329 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 PAXBP1Q9Y5B6 917 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 PCDHB9Q9Y5E1 797 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 HS3ST4Q9Y661 456 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 DMXL2Q8TDJ6 3036 aa9.29□□□□□ -0.92
LMO3-222ENST00000540445 A0A1W2PP55 124 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 F8VZ95 297 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 MID1O15344 667 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 RNASEH2AO75792 299 aaKnown RBP9.28□□□□□ -0.92
LMO3-222ENST00000540445 ADCY5O95622 1261 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 LSM8O95777 96 aaKnown RBP9.28□□□□□ -0.92
LMO3-222ENST00000540445 IL1BP01584 269 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 SLC8A1P32418 973 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 CDH5P33151 784 aaPredicted RBP9.28□□□□□ -0.92
LMO3-222ENST00000540445 RDXP35241 583 aaKnown RBP9.28□□□□□ -0.92
LMO3-222ENST00000540445 GGCXP38435 758 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 GABRB2P47870 512 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 CSNK1EP49674 416 aaKnown RBP9.28□□□□□ -0.92
LMO3-222ENST00000540445 STK19P49842 368 aaPredicted RBP9.28□□□□□ -0.92
LMO3-222ENST00000540445 PLK1P53350 603 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 CENPCQ03188 943 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 UBXN1Q04323 297 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 TEAD4Q15561 434 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 CST6Q15828 149 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 STX1AQ16623 288 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 SLC25A52Q3SY17 297 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 BRMS1LQ5PSV4 323 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 CDKAL1Q5VV42 579 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 NAA35Q5VZE5 725 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 PHLDB2Q86SQ0 1253 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 STK40Q8N2I9 435 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 KDM1BQ8NB78 822 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 NEK11Q8NG66 645 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 BIRC7Q96CA5 298 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 MRGPRX3Q96LB0 322 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 TBCBQ99426 244 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 FEM1AQ9BSK4 669 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 ZDHHC5Q9C0B5 715 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 MUC3BQ9H195 1237 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 PCED1AQ9H1Q7 454 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 NEUROG2Q9H2A3 272 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 PABPC3Q9H361 631 aaKnown RBP9.28□□□□□ -0.92
LMO3-222ENST00000540445 PIGVQ9NUD9 493 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 DNAAF2Q9NVR5 837 aaKnown RBP9.28□□□□□ -0.92
LMO3-222ENST00000540445 SLC25A13Q9UJS0 675 aa9.28□□□□□ -0.92
LMO3-222ENST00000540445 SPAARA0A1B0GVQ0 90 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 LRRC72A6NJI9 287 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 BNIP3LO60238 219 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 SRGAP2O75044 1071 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 CLDN11O75508 207 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 CER1O95813 267 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 MBD3O95983 291 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 TOP3BO95985 862 aaKnown RBP9.27□□□□□ -0.93
LMO3-222ENST00000540445 CD59P13987 128 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 TFE3P19532 575 aaPredicted RBP9.27□□□□□ -0.93
LMO3-222ENST00000540445 SOX5P35711 763 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 STAT1P42224 750 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 PSMD8P48556 350 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 CXCR3P49682 368 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 AFF3P51826 1226 aaKnown RBP9.27□□□□□ -0.93
LMO3-222ENST00000540445 COPB1P53618 953 aaKnown RBP9.27□□□□□ -0.93
LMO3-222ENST00000540445 GALCP54803 685 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 CDH4P55283 916 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 SIM1P81133 766 aaPredicted RBP9.27□□□□□ -0.93
LMO3-222ENST00000540445 ATP11AP98196 1134 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 GRIK2Q13002 908 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 SLC14A1Q13336 389 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 ARID5BQ14865 1188 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 SYCP1Q15431 976 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 IL27RAQ6UWB1 636 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 RBM43Q6ZSC3 357 aaKnown RBP9.27□□□□□ -0.93
LMO3-222ENST00000540445 USP30Q70CQ3 517 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 ADAT2Q7Z6V5 191 aaKnown RBP9.27□□□□□ -0.93
LMO3-222ENST00000540445 C14orf80Q86SX3 495 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 ZNF677Q86XU0 584 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 XYLT1Q86Y38 959 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 OR14C36Q8NHC7 312 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms