RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 ERVW-1Q9UQF0 538 aa16.02■□□□□ 0.16
PUDP-206ENST00000540122 HBS1LQ9Y450 684 aaKnown RBP16.02■□□□□ 0.16
PUDP-206ENST00000540122 CASC3O15234 703 aaKnown RBP16.01■□□□□ 0.15
PUDP-206ENST00000540122 CLIC2O15247 247 aa16.01■□□□□ 0.15
PUDP-206ENST00000540122 SLC7A4O43246 635 aa16.01■□□□□ 0.15
PUDP-206ENST00000540122 CASRP41180 1078 aa16.01■□□□□ 0.15
PUDP-206ENST00000540122 CYP4F2P78329 520 aa16.01■□□□□ 0.15
PUDP-206ENST00000540122 PIK3R6Q5UE93 754 aa16.01■□□□□ 0.15
PUDP-206ENST00000540122 CCDC65Q8IXS2 484 aa16.01■□□□□ 0.15
PUDP-206ENST00000540122 ZNF557Q8N988 423 aaPredicted RBP16.01■□□□□ 0.15
PUDP-206ENST00000540122 OR13H1Q8NG92 308 aa16.01■□□□□ 0.15
PUDP-206ENST00000540122 HTR3CQ8WXA8 447 aa16.01■□□□□ 0.15
PUDP-206ENST00000540122 PLEKHB1Q9UF11 243 aaPredicted RBP16.01■□□□□ 0.15
PUDP-206ENST00000540122 SLCO3A1Q9UIG8 710 aa16.01■□□□□ 0.15
PUDP-206ENST00000540122 KIF26BQ2KJY2 2108 aa16■□□□□ 0.15
PUDP-206ENST00000540122 EME2A4GXA9 379 aaPredicted RBP16■□□□□ 0.15
PUDP-206ENST00000540122 PLD2O14939 933 aa16■□□□□ 0.15
PUDP-206ENST00000540122 RNGTTO60942 597 aaKnown RBP16■□□□□ 0.15
PUDP-206ENST00000540122 C4BPAP04003 597 aaKnown RBP16■□□□□ 0.15
PUDP-206ENST00000540122 SRPRAP08240 638 aaKnown RBP16■□□□□ 0.15
PUDP-206ENST00000540122 LIPCP11150 499 aa16■□□□□ 0.15
PUDP-206ENST00000540122 PRLRP16471 622 aa16■□□□□ 0.15
PUDP-206ENST00000540122 WT1P19544 449 aaPredicted RBP16■□□□□ 0.15
PUDP-206ENST00000540122 MORC3Q14149 939 aa16■□□□□ 0.15
PUDP-206ENST00000540122 ELAVL3Q14576 367 aaKnown RBP16■□□□□ 0.15
PUDP-206ENST00000540122 KMT5BQ4FZB7 885 aa16■□□□□ 0.15
PUDP-206ENST00000540122 ZNF542PQ5EBM4 170 aa16■□□□□ 0.15
PUDP-206ENST00000540122 VASH2Q86V25 355 aa16■□□□□ 0.15
PUDP-206ENST00000540122 JAMLQ86YT9 394 aa16■□□□□ 0.15
PUDP-206ENST00000540122 SLC22A18ASQ8N1D0 253 aa16■□□□□ 0.15
PUDP-206ENST00000540122 FIBINQ8TAL6 211 aa16■□□□□ 0.15
PUDP-206ENST00000540122 PTPRN2Q92932 1015 aa16■□□□□ 0.15
PUDP-206ENST00000540122 LIN37Q96GY3 246 aaPredicted RBP16■□□□□ 0.15
PUDP-206ENST00000540122 ADNPQ9H2P0 1102 aa16■□□□□ 0.15
PUDP-206ENST00000540122 OLA1Q9NTK5 396 aaKnown RBP16■□□□□ 0.15
PUDP-206ENST00000540122 NCKIPSDQ9NZQ3 722 aa16■□□□□ 0.15
PUDP-206ENST00000540122 STIM2Q9P246 746 aa16■□□□□ 0.15
PUDP-206ENST00000540122 SFMBT1Q9UHJ3 866 aa16■□□□□ 0.15
PUDP-206ENST00000540122 GOLGA6L7A0A1B0GV03 622 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 LRRIQ3A6PVS8 624 aaPredicted RBP15.99■□□□□ 0.15
PUDP-206ENST00000540122 EIF3DO15371 548 aaKnown RBP eCLIP15.99■□□□□ 0.15
PUDP-206ENST00000540122 SLC31A1O15431 190 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 SLC6A4P31645 630 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 AP3M2P53677 418 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 INCA1Q0VD86 236 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 DRAP1Q14919 205 aaPredicted RBP15.99■□□□□ 0.15
PUDP-206ENST00000540122 NCAPHQ15003 741 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 SGSM1Q2NKQ1 1148 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 PITRM1Q5JRX3 1037 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 MANEAQ5SRI9 462 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 PERM1Q5SV97 790 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 AGBL4Q5VU57 503 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 SPOPLQ6IQ16 392 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 MMS22LQ6ZRQ5 1243 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 ZSCAN1Q8NBB4 408 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 ZNF548Q8NEK5 533 aaPredicted RBP15.99■□□□□ 0.15
PUDP-206ENST00000540122 IFT43Q96FT9 208 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 NOX5Q96PH1 765 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 NT5C1AQ9BXI3 368 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 FZD3Q9NPG1 666 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 DNAJC28Q9NX36 388 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 NBASA2RRP1 2371 aa15.99■□□□□ 0.15
PUDP-206ENST00000540122 MSI1O43347 362 aaKnown RBP15.98■□□□□ 0.15
PUDP-206ENST00000540122 VAV1P15498 845 aa15.98■□□□□ 0.15
PUDP-206ENST00000540122 UGT1A5P35504 534 aa15.98■□□□□ 0.15
PUDP-206ENST00000540122 HNRNPKP61978 463 aaKnown RBP eCLIP15.98■□□□□ 0.15
PUDP-206ENST00000540122 CLDN10P78369 228 aa15.98■□□□□ 0.15
PUDP-206ENST00000540122 ECT2LQ008S8 904 aa15.98■□□□□ 0.15
PUDP-206ENST00000540122 NR0B2Q15466 257 aa15.98■□□□□ 0.15
PUDP-206ENST00000540122 FAM133BQ5BKY9 247 aaKnown RBP15.98■□□□□ 0.15
PUDP-206ENST00000540122 FSCBQ5H9T9 825 aa15.98■□□□□ 0.15
PUDP-206ENST00000540122 RAB41Q5JT25 222 aa15.98■□□□□ 0.15
PUDP-206ENST00000540122 PPP1R26Q5T8A7 1209 aaPredicted RBP15.98■□□□□ 0.15
PUDP-206ENST00000540122 EPM2AIP1Q7L775 607 aaPredicted RBP15.98■□□□□ 0.15
PUDP-206ENST00000540122 BHLHA9Q7RTU4 235 aa15.98■□□□□ 0.15
PUDP-206ENST00000540122 FBXO39Q8N4B4 442 aa15.98■□□□□ 0.15
PUDP-206ENST00000540122 ZNF507Q8TCN5 953 aa15.98■□□□□ 0.15
PUDP-206ENST00000540122 NDRG1Q92597 394 aaKnown RBP15.98■□□□□ 0.15
PUDP-206ENST00000540122 KLK6Q92876 244 aa15.98■□□□□ 0.15
PUDP-206ENST00000540122 PRICKLE1Q96MT3 831 aaPredicted RBP15.98■□□□□ 0.15
PUDP-206ENST00000540122 IRX2Q9BZI1 471 aaPredicted RBP15.98■□□□□ 0.15
PUDP-206ENST00000540122 NYNRINQ9P2P1 1898 aaKnown RBP15.98■□□□□ 0.15
PUDP-206ENST00000540122 SPTBN1Q01082 2364 aaKnown RBP15.97■□□□□ 0.15
PUDP-206ENST00000540122 H3BQV1 296 aa15.97■□□□□ 0.15
PUDP-206ENST00000540122 RIOK3O14730 519 aaKnown RBP15.97■□□□□ 0.15
PUDP-206ENST00000540122 MUSKO15146 869 aa15.97■□□□□ 0.15
PUDP-206ENST00000540122 IRAK2O43187 625 aa15.97■□□□□ 0.15
PUDP-206ENST00000540122 CNTN1Q12860 1018 aa15.97■□□□□ 0.15
PUDP-206ENST00000540122 SPIDRQ14159 915 aa15.97■□□□□ 0.15
PUDP-206ENST00000540122 RNF219Q5W0B1 726 aaPredicted RBP15.97■□□□□ 0.15
PUDP-206ENST00000540122 DSG4Q86SJ6 1040 aa15.97■□□□□ 0.15
PUDP-206ENST00000540122 PIGZQ86VD9 579 aa15.97■□□□□ 0.15
PUDP-206ENST00000540122 CARNMT1Q8N4J0 409 aa15.97■□□□□ 0.15
PUDP-206ENST00000540122 HJURPQ8NCD3 748 aaPredicted RBP15.97■□□□□ 0.15
PUDP-206ENST00000540122 WDR48Q8TAF3 677 aa15.97■□□□□ 0.15
PUDP-206ENST00000540122 PARD3BQ8TEW8 1205 aa15.97■□□□□ 0.15
PUDP-206ENST00000540122 RPL10LQ96L21 214 aaKnown RBP15.97■□□□□ 0.15
PUDP-206ENST00000540122 SPAG5Q96R06 1193 aa15.97■□□□□ 0.15
PUDP-206ENST00000540122 SYNDIG1Q9H7V2 258 aa15.97■□□□□ 0.15
PUDP-206ENST00000540122 PREBQ9HCU5 417 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms