RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 CAPN9O14815 690 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 PJA2O43164 708 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 USP1O94782 785 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 EEF2P13639 858 aaKnown RBP6.4□□□□□ -1.38
MRE11-209ENST00000540013 RPS2P15880 293 aaKnown RBP6.4□□□□□ -1.38
MRE11-209ENST00000540013 ACRV1P26436 265 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 MGAT1P26572 445 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 PGM1P36871 562 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 SLC6A9P48067 706 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 ALDH18A1P54886 795 aaKnown RBP6.4□□□□□ -1.38
MRE11-209ENST00000540013 RPS3AP61247 264 aaKnown RBP6.4□□□□□ -1.38
MRE11-209ENST00000540013 RPP30P78346 268 aaKnown RBP6.4□□□□□ -1.38
MRE11-209ENST00000540013 CRHR2Q13324 411 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 PRICKLE4Q2TBC4 344 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 AMOTQ4VCS5 1084 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 PLEKHO1Q53GL0 409 aaPredicted RBP6.4□□□□□ -1.38
MRE11-209ENST00000540013 BMP2KLQ5H9B9 411 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 FAM47AQ5JRC9 791 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 ZNF530Q6P9A1 599 aaPredicted RBP6.4□□□□□ -1.38
MRE11-209ENST00000540013 Q6ZVL8 140 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 ZNF572Q7Z3I7 529 aaPredicted RBP6.4□□□□□ -1.38
MRE11-209ENST00000540013 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.4□□□□□ -1.38
MRE11-209ENST00000540013 RAB11FIP4Q86YS3 637 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 YAF2Q8IY57 180 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 C17orf53Q8N3J3 647 aaPredicted RBP6.4□□□□□ -1.38
MRE11-209ENST00000540013 GALNT4Q8N4A0 578 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 LILRA3Q8N6C8 439 aaPredicted RBP6.4□□□□□ -1.38
MRE11-209ENST00000540013 AOPEPQ8N6M6 819 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 DCBLD1Q8N8Z6 715 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 NFKBIDQ8NI38 313 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 ETNPPLQ8TBG4 499 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 MDM1Q8TC05 714 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 PTP4A1Q93096 173 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 KTI12Q96EK9 354 aaPredicted RBP6.4□□□□□ -1.38
MRE11-209ENST00000540013 TMX3Q96JJ7 454 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 GPR20Q99678 358 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 ACAT2Q9BWD1 397 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 TRIM5Q9C035 493 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 USP44Q9H0E7 712 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 PCDHAC1Q9H158 963 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 INTS10Q9NVR2 710 aaKnown RBP6.4□□□□□ -1.38
MRE11-209ENST00000540013 COMMD8Q9NX08 183 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 TMOD3Q9NYL9 352 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 DAPP1Q9UN19 280 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 CCL27Q9Y4X3 112 aa6.4□□□□□ -1.38
MRE11-209ENST00000540013 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.4□□□□□ -1.38
MRE11-209ENST00000540013 NPC1L1Q9UHC9 1359 aa6.4□□□□□ -1.39
MRE11-209ENST00000540013 ZNF831Q5JPB2 1677 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 ERVV-2B6SEH9 535 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 C1QTNF3-AMACRE9PGA6 284 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 TAF4O00268 1085 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 PCDH17O14917 1159 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 ADAM20O43506 726 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 DNPH1O43598 174 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 KRT38O76015 456 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 CCNDBP1O95273 360 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 AHSGP02765 367 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 SNRPA1P09661 255 aaKnown RBP6.39□□□□□ -1.39
MRE11-209ENST00000540013 EPHA8P29322 1005 aaPredicted RBP6.39□□□□□ -1.39
MRE11-209ENST00000540013 SREBF1P36956 1147 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 MTHFSP49914 203 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 NSUN2Q08J23 767 aaKnown RBP eCLIP6.39□□□□□ -1.39
MRE11-209ENST00000540013 LRRC74AQ0VAA2 488 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 HABP2Q14520 560 aaPredicted RBP6.39□□□□□ -1.39
MRE11-209ENST00000540013 TBCCQ15814 346 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 SLC5A9Q2M3M2 681 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 PLEKHS1Q5SXH7 462 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 TTC22Q5TAA0 569 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 DENND5BQ6ZUT9 1274 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 IKBIPQ70UQ0 350 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 LURAP1LQ8IV03 231 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 Q8NFD4 153 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 METTL6Q8TCB7 284 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 DEPDC1BQ8WUY9 529 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 EXOC4Q96A65 974 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 RBM18Q96H35 190 aaKnown RBP6.39□□□□□ -1.39
MRE11-209ENST00000540013 CABS1Q96KC9 395 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 SYT17Q9BSW7 474 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 KRTAP3-1Q9BYR8 98 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 NDST4Q9H3R1 872 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 PDE7BQ9NP56 450 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 SH3BGRL2Q9UJC5 107 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 ZMYND8Q9ULU4 1186 aaPredicted RBP6.39□□□□□ -1.39
MRE11-209ENST00000540013 DUSP12Q9UNI6 340 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 CAMK2AQ9UQM7 478 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 KDRP35968 1356 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 MAP3K5Q99683 1374 aa6.39□□□□□ -1.39
MRE11-209ENST00000540013 KDM6AO15550 1401 aaPredicted RBP6.39□□□□□ -1.39
MRE11-209ENST00000540013 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
MRE11-209ENST00000540013 SYNCRIPO60506 623 aaKnown RBP6.38□□□□□ -1.39
MRE11-209ENST00000540013 PIAS2O75928 621 aa6.38□□□□□ -1.39
MRE11-209ENST00000540013 METTL18O95568 372 aa6.38□□□□□ -1.39
MRE11-209ENST00000540013 NTSR2O95665 410 aa6.38□□□□□ -1.39
MRE11-209ENST00000540013 TFRCP02786 760 aaKnown RBP6.38□□□□□ -1.39
MRE11-209ENST00000540013 TUBB4AP04350 444 aa6.38□□□□□ -1.39
MRE11-209ENST00000540013 UBL4AP11441 157 aa6.38□□□□□ -1.39
MRE11-209ENST00000540013 KCNJ5P48544 419 aa6.38□□□□□ -1.39
MRE11-209ENST00000540013 EXOSC9Q06265 439 aaKnown RBP6.38□□□□□ -1.39
MRE11-209ENST00000540013 SLC14A1Q13336 389 aa6.38□□□□□ -1.39
MRE11-209ENST00000540013 CTBP1Q13363 440 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms