RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 ANAPC7Q9UJX3 599 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 ERVW-1Q9UQF0 538 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 OR51B4Q9Y5P0 310 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 MYO18AQ92614 2054 aaKnown RBP13.8□□□□□ -0.2
PRPF19-204ENST00000539960 TCRBV21S2A2A0A5A6 115 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 ZBTB24O43167 697 aaPredicted RBP13.8□□□□□ -0.2
PRPF19-204ENST00000539960 PRPSAP2O60256 369 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 SYNCRIPO60506 623 aaKnown RBP13.8□□□□□ -0.2
PRPF19-204ENST00000539960 LRCH4O75427 683 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 RHOCP08134 193 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 SRPRAP08240 638 aaKnown RBP13.8□□□□□ -0.2
PRPF19-204ENST00000539960 FECHP22830 423 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 PRKCHP24723 683 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 OR1E1P30953 314 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 CTSOP43234 321 aaPredicted RBP13.8□□□□□ -0.2
PRPF19-204ENST00000539960 SULT2A1Q06520 285 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 FNDC3BQ53EP0 1204 aaKnown RBP13.8□□□□□ -0.2
PRPF19-204ENST00000539960 BOLA3Q53S33 107 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 C6orf118Q5T5N4 469 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 ANO7Q6IWH7 933 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 TMTC1Q8IUR5 882 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 PSTKQ8IV42 348 aaKnown RBP13.8□□□□□ -0.2
PRPF19-204ENST00000539960 KDM1BQ8NB78 822 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 ZNF564Q8TBZ8 553 aaPredicted RBP13.8□□□□□ -0.2
PRPF19-204ENST00000539960 TBC1D31Q96DN5 1066 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 BTBD6Q96KE9 485 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 MRGPRX3Q96LB0 322 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 PEBP4Q96S96 227 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 PHOX2BQ99453 314 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 SUN2Q9UH99 717 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 INTUQ9ULD6 942 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 USP18Q9UMW8 372 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 RAD54BQ9Y620 910 aa13.8□□□□□ -0.2
PRPF19-204ENST00000539960 ILVBLA1L0T0 632 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 EIF3CLB5ME19 914 aaKnown RBP13.79□□□□□ -0.2
PRPF19-204ENST00000539960 CREB3O43889 395 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 LCA5LO95447 670 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 EPHX1P07099 455 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 ST8SIA6P61647 398 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 SEMA3BQ13214 749 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 STARD3Q14849 445 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 ZNF783Q6ZMS7 281 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 CYP4V2Q6ZWL3 525 aaPredicted RBP13.79□□□□□ -0.2
PRPF19-204ENST00000539960 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.79□□□□□ -0.2
PRPF19-204ENST00000539960 NLRP14Q86W24 1093 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 SPC24Q8NBT2 197 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 MDGA1Q8NFP4 955 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 SLC35G2Q8TBE7 412 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 HMGB4Q8WW32 186 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 ERLEC1Q96DZ1 483 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 FAM122AQ96E09 287 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 MYO19Q96H55 970 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 EIF3CQ99613 913 aaKnown RBP13.79□□□□□ -0.2
PRPF19-204ENST00000539960 EPAS1Q99814 870 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 MUC3BQ9H195 1237 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 DHX35Q9H5Z1 703 aaKnown RBP13.79□□□□□ -0.2
PRPF19-204ENST00000539960 TMEM248Q9NWD8 314 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 GPATCH2LQ9NWQ4 482 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 BCCIPQ9P287 314 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRPF19-204ENST00000539960 SLCO3A1Q9UIG8 710 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 VPS28Q9UK41 221 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 AP4E1Q9UPM8 1137 aa13.79□□□□□ -0.2
PRPF19-204ENST00000539960 EPN1Q9Y6I3 576 aaPredicted RBP13.79□□□□□ -0.2
PRPF19-204ENST00000539960 A0A0D9SEW6 157 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 HLA-EP13747 358 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 GABRG2P18507 467 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 IL1R2P27930 398 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 EPHB2P29323 1055 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 HTR7P34969 479 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 CYLC1P35663 651 aaPredicted RBP13.78□□□□□ -0.2
PRPF19-204ENST00000539960 NNMTP40261 264 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 MAGEA1P43355 309 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 MAPKAPK2P49137 400 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 NUMBP49757 651 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 VASPP50552 380 aaPredicted RBP13.78□□□□□ -0.2
PRPF19-204ENST00000539960 SRSF5Q13243 272 aaKnown RBP13.78□□□□□ -0.2
PRPF19-204ENST00000539960 CAMK2GQ13555 558 aaPredicted RBP13.78□□□□□ -0.2
PRPF19-204ENST00000539960 SPA17Q15506 151 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 CA9Q16790 459 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 USP39Q53GS9 565 aaKnown RBP13.78□□□□□ -0.2
PRPF19-204ENST00000539960 DAB2IPQ5VWQ8 1189 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 PGBD3Q8N328 593 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 GAB3Q8WWW8 586 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 RPL10LQ96L21 214 aaKnown RBP13.78□□□□□ -0.2
PRPF19-204ENST00000539960 PSMB7Q99436 277 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 SNRNP25Q9BV90 132 aaKnown RBP13.78□□□□□ -0.2
PRPF19-204ENST00000539960 LCMT1Q9UIC8 334 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 NEU3Q9UQ49 428 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 PCDHA13Q9Y5I0 950 aa13.78□□□□□ -0.2
PRPF19-204ENST00000539960 WASH4PA8MWX3 477 aa13.77□□□□□ -0.21
PRPF19-204ENST00000539960 TTC34A8MYJ7 566 aa13.77□□□□□ -0.21
PRPF19-204ENST00000539960 RPP40O75818 363 aaKnown RBP13.77□□□□□ -0.21
PRPF19-204ENST00000539960 MTA2O94776 668 aa13.77□□□□□ -0.21
PRPF19-204ENST00000539960 PROSCO94903 275 aa13.77□□□□□ -0.21
PRPF19-204ENST00000539960 TCF4P15884 667 aa13.77□□□□□ -0.21
PRPF19-204ENST00000539960 NDUFV2P19404 249 aa13.77□□□□□ -0.21
PRPF19-204ENST00000539960 PLA2G5P39877 138 aa13.77□□□□□ -0.21
PRPF19-204ENST00000539960 HCAR3P49019 387 aa13.77□□□□□ -0.21
PRPF19-204ENST00000539960 KRT83P78385 493 aa13.77□□□□□ -0.21
PRPF19-204ENST00000539960 GNA12Q03113 381 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms