RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 MLPHQ9BV36 600 aaPredicted RBP18.34■□□□□ 0.53
GNE-204ENST00000539208 EBF2Q9HAK2 575 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 GABRQQ9UN88 632 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 PSMD3O43242 534 aa18.33■□□□□ 0.52
GNE-204ENST00000539208 PLIN3O60664 434 aa18.33■□□□□ 0.52
GNE-204ENST00000539208 ERVK-10P10266 1014 aa18.33■□□□□ 0.52
GNE-204ENST00000539208 TYMPP19971 482 aa18.33■□□□□ 0.52
GNE-204ENST00000539208 DNAJB2P25686 324 aa18.33■□□□□ 0.52
GNE-204ENST00000539208 MAGEA12P43365 314 aa18.33■□□□□ 0.52
GNE-204ENST00000539208 PDE1BQ01064 536 aa18.33■□□□□ 0.52
GNE-204ENST00000539208 KCNA10Q16322 511 aa18.33■□□□□ 0.52
GNE-204ENST00000539208 BRMS1LQ5PSV4 323 aa18.33■□□□□ 0.52
GNE-204ENST00000539208 CCSAPQ6IQ19 270 aaPredicted RBP18.33■□□□□ 0.52
GNE-204ENST00000539208 AGAP3Q96P47 875 aa18.33■□□□□ 0.52
GNE-204ENST00000539208 HAPLN3Q96S86 360 aa18.33■□□□□ 0.52
GNE-204ENST00000539208 SIKE1Q9BRV8 207 aa18.33■□□□□ 0.52
GNE-204ENST00000539208 ARL8BQ9NVJ2 186 aa18.33■□□□□ 0.52
GNE-204ENST00000539208 SQORQ9Y6N5 450 aa18.33■□□□□ 0.52
GNE-204ENST00000539208 TDRD15B5MCY1 1934 aaKnown RBP18.33■□□□□ 0.52
GNE-204ENST00000539208 ZCWPW2A0A1B0GU75 182 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 CACNG3O60359 315 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 CALB2P22676 271 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 CST5P28325 142 aaPredicted RBP18.32■□□□□ 0.52
GNE-204ENST00000539208 TM4SF4P48230 202 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 ANKRD20A4Q4UJ75 823 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 FASTKD1Q53R41 847 aaKnown RBP18.32■□□□□ 0.52
GNE-204ENST00000539208 N4BP2L1Q5TBK1 243 aaPredicted RBP18.32■□□□□ 0.52
GNE-204ENST00000539208 DNAAF3Q8N9W5 541 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 FAM13CQ8NE31 585 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 RNF34Q969K3 372 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 TACO1Q9BSH4 297 aaKnown RBP18.32■□□□□ 0.52
GNE-204ENST00000539208 WWP1Q9H0M0 922 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 FBXO6Q9NRD1 293 aaPredicted RBP18.32■□□□□ 0.52
GNE-204ENST00000539208 ABCC13Q9NSE7 274 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 SNX10Q9Y5X0 201 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 PATJQ8NI35 1801 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 NFKB1P19838 968 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 SPRP35270 261 aaPredicted RBP18.32■□□□□ 0.52
GNE-204ENST00000539208 FLT3LGP49771 235 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 TSPY1Q01534 308 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 CACNB2Q08289 660 aaPredicted RBP18.32■□□□□ 0.52
GNE-204ENST00000539208 OLIG2Q13516 323 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 E2F5Q15329 346 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 HSF5Q4G112 596 aaPredicted RBP18.32■□□□□ 0.52
GNE-204ENST00000539208 PAN2Q504Q3 1202 aaKnown RBP18.32■□□□□ 0.52
GNE-204ENST00000539208 WASHC2DQ5SRD0 308 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 MBLAC2Q68D91 279 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 ZNF598Q86UK7 904 aaKnown RBP18.32■□□□□ 0.52
GNE-204ENST00000539208 ARID3BQ8IVW6 561 aaPredicted RBP18.32■□□□□ 0.52
GNE-204ENST00000539208 RBBP8Q99708 897 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 BTBD10Q9BSF8 475 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 ARHGAP39Q9C0H5 1083 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 IL22Q9GZX6 179 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 NMRK2Q9NPI5 230 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 NEU3Q9UQ49 428 aa18.32■□□□□ 0.52
GNE-204ENST00000539208 ARHGAP42A6NI28 874 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 FCHO1O14526 889 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 IRAK2O43187 625 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 USP12O75317 370 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 TOP3BO95985 862 aaKnown RBP18.31■□□□□ 0.52
GNE-204ENST00000539208 CCNCP24863 283 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 HOXC13P31276 330 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 PRPSAP1Q14558 356 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 CES3Q6UWW8 571 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 PAXIP1Q6ZW49 1069 aaPredicted RBP18.31■□□□□ 0.52
GNE-204ENST00000539208 SH3TC2Q8TF17 1288 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 ZNF669Q96BR6 464 aaPredicted RBP18.31■□□□□ 0.52
GNE-204ENST00000539208 TMEM209Q96SK2 561 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 HBS1LQ9Y450 684 aaKnown RBP18.31■□□□□ 0.52
GNE-204ENST00000539208 PTPRDP23468 1912 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 NLRC5Q86WI3 1866 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 CCDC195A0A1B0GUA6 201 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 TYK2P29597 1187 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 LIMK2P53671 638 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 TRIM71Q2Q1W2 868 aaKnown RBP18.31■□□□□ 0.52
GNE-204ENST00000539208 C4orf50Q6ZRC1 276 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 LINC00523Q86TU6 105 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 C20orf27Q9GZN8 174 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 L3MBTL1Q9Y468 752 aa18.31■□□□□ 0.52
GNE-204ENST00000539208 TNFRSF10BO14763 440 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 FGF10O15520 208 aaPredicted RBP18.3■□□□□ 0.52
GNE-204ENST00000539208 JCHAINP01591 159 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 PROCP04070 461 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 FGF3P11487 239 aaPredicted RBP18.3■□□□□ 0.52
GNE-204ENST00000539208 TRIM32Q13049 653 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 TEDDM1Q5T9Z0 273 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 NAPEPLDQ6IQ20 393 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 C16orf46Q6P387 395 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 LZTR1Q8N653 840 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 SCAMP5Q8TAC9 235 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 SMOC2Q9H3U7 446 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 ZNF395Q9H8N7 513 aaPredicted RBP18.3■□□□□ 0.52
GNE-204ENST00000539208 NOP53Q9NZM5 478 aaKnown RBP18.3■□□□□ 0.52
GNE-204ENST00000539208 PCDHB8Q9UN66 801 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 SOX13Q9UN79 622 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 INPP5FQ9Y2H2 1132 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 C2orf71A6NGG8 1288 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 PRKCGP05129 697 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 GRK2P25098 689 aa18.3■□□□□ 0.52
GNE-204ENST00000539208 SERPINB8P50452 374 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms