RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 MYBL1P10243 752 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 POLR2EP19388 210 aaKnown RBP14.11□□□□□ -0.15
CD9-208ENST00000538834 CTSOP43234 321 aaPredicted RBP14.11□□□□□ -0.15
CD9-208ENST00000538834 AIF1P55008 147 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 CDH18Q13634 790 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 USP39Q53GS9 565 aaKnown RBP14.11□□□□□ -0.15
CD9-208ENST00000538834 SPDYCQ5MJ68 293 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 PLA2G2CQ5R387 149 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 FAM72AQ5TYM5 149 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 PMS2CLQ68D20 193 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 SDE2Q6IQ49 451 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 FAM72DQ6L9T8 149 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 SETD3Q86TU7 594 aaPredicted RBP14.11□□□□□ -0.15
CD9-208ENST00000538834 FAM72BQ86X60 149 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 CCDC185Q8N715 623 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 OR8K1Q8NGG5 319 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 CYB5D2Q8WUJ1 264 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 MCEEQ96PE7 176 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 TPSD1Q9BZJ3 242 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 TRIM7Q9C029 511 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 CIPCQ9C0C6 399 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 PRSS16Q9NQE7 514 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 ITM2CQ9NQX7 267 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 OR12D3Q9UGF7 316 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 ERVW-1Q9UQF0 538 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 SHROOM3Q8TF72 1996 aa14.11□□□□□ -0.15
CD9-208ENST00000538834 ASCC3Q8N3C0 2202 aaKnown RBP14.1□□□□□ -0.15
CD9-208ENST00000538834 IGHV1OR15-9A0A0B4J2B8 117 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 TMCO5BA8MYB1 307 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 DCLK1O15075 740 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 ATMINO43313 823 aaPredicted RBP14.1□□□□□ -0.15
CD9-208ENST00000538834 ZMPSTE24O75844 475 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 EPN2O95208 641 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 CYP1A2P05177 515 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 RETP07949 1114 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 BCKDHBP21953 392 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 L1CAMP32004 1257 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 CDO1Q16878 200 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 HNRNPA1L2Q32P51 320 aaKnown RBP14.1□□□□□ -0.15
CD9-208ENST00000538834 ZNF783Q6ZMS7 281 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 C11orf74Q86VG3 221 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 DCLK2Q8N568 766 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 FRMD1Q8N878 549 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 OR2T3Q8NH03 318 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 FRS2Q8WU20 508 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 HMGB4Q8WW32 186 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 PTPRN2Q92932 1015 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 TRIM11Q96F44 468 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 FBRSQ9HAH7 460 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 MPP6Q9NZW5 540 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 CNOT8Q9UFF9 292 aaKnown RBP14.1□□□□□ -0.15
CD9-208ENST00000538834 SLCO3A1Q9UIG8 710 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 FZD10Q9ULW2 581 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 PLA2G4CQ9UP65 541 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 PLXNA2O75051 1894 aa14.1□□□□□ -0.15
CD9-208ENST00000538834 PCNX2A6NKB5 2137 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.09□□□□□ -0.15
CD9-208ENST00000538834 ILVBLA1L0T0 632 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 TARSL2A2RTX5 802 aaKnown RBP14.09□□□□□ -0.15
CD9-208ENST00000538834 WASH4PA8MWX3 477 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 ATP9BO43861 1147 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 MFAP3LO75121 409 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 LRIG2O94898 1065 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 HLA-EP13747 358 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 ECT2LQ008S8 904 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 SULT2A1Q06520 285 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 ZNF177Q13360 481 aaPredicted RBP14.09□□□□□ -0.15
CD9-208ENST00000538834 ACAP1Q15027 740 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 SLC18A3Q16572 532 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 ARL13BQ3SXY8 428 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 C9orf64Q5T6V5 341 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 PEAR1Q5VY43 1037 aaPredicted RBP14.09□□□□□ -0.15
CD9-208ENST00000538834 ALKBH5Q6P6C2 394 aaKnown RBP14.09□□□□□ -0.15
CD9-208ENST00000538834 SERPINA13PQ6UXR4 307 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 TMC6Q7Z403 805 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 NIPA2Q8N8Q9 360 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 RLN3Q8WXF3 142 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 FAM131CQ96AQ9 280 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 FAM129BQ96TA1 746 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 ACE2Q9BYF1 805 aaPredicted RBP14.09□□□□□ -0.15
CD9-208ENST00000538834 SLC6A17Q9H1V8 727 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 RSPH9Q9H1X1 276 aaPredicted RBP14.09□□□□□ -0.15
CD9-208ENST00000538834 PARD6AQ9NPB6 346 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 CD93Q9NPY3 652 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 ABHD10Q9NUJ1 306 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 TMEM248Q9NWD8 314 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 SUN2Q9UH99 717 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 HS3ST2Q9Y278 367 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 CABIN1Q9Y6J0 2220 aa14.09□□□□□ -0.15
CD9-208ENST00000538834 LRRK1Q38SD2 2015 aa14.08□□□□□ -0.15
CD9-208ENST00000538834 A0A0D9SEW6 157 aa14.08□□□□□ -0.16
CD9-208ENST00000538834 ZNF217O75362 1048 aa14.08□□□□□ -0.16
CD9-208ENST00000538834 LRCH4O75427 683 aa14.08□□□□□ -0.16
CD9-208ENST00000538834 MOCS3O95396 460 aa14.08□□□□□ -0.16
CD9-208ENST00000538834 CD160O95971 181 aa14.08□□□□□ -0.16
CD9-208ENST00000538834 EPHX1P07099 455 aa14.08□□□□□ -0.16
CD9-208ENST00000538834 RHOQP17081 205 aa14.08□□□□□ -0.16
CD9-208ENST00000538834 FECHP22830 423 aa14.08□□□□□ -0.16
CD9-208ENST00000538834 EIF4A3P38919 411 aaKnown RBP14.08□□□□□ -0.16
CD9-208ENST00000538834 BYSLQ13895 437 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms