RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 DCPSQ96C86 337 aaKnown RBP12.68□□□□□ -0.38
USP3-203ENST00000538686 ADI1Q9BV57 179 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 SEZ6LQ9BYH1 1024 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 C20orf27Q9GZN8 174 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 ZNF395Q9H8N7 513 aaPredicted RBP12.68□□□□□ -0.38
USP3-203ENST00000538686 IL17RBQ9NRM6 502 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 C20orf96Q9NUD7 363 aaPredicted RBP12.68□□□□□ -0.38
USP3-203ENST00000538686 ABI2Q9NYB9 513 aaPredicted RBP12.68□□□□□ -0.38
USP3-203ENST00000538686 MTRRQ9UBK8 725 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 TNFRSF10DQ9UBN6 386 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 SERPINA10Q9UK55 444 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 SLC27A5Q9Y2P5 690 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 CROCCQ5TZA2 2017 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 RICTORQ6R327 1708 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 BAZ2AQ9UIF9 1905 aaKnown RBP12.68□□□□□ -0.38
USP3-203ENST00000538686 OR5K3A6NET4 321 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 AIM2O14862 343 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 BET1O15155 118 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 DAB1O75553 588 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 GCNT3O95395 438 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 TDP2O95551 362 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 PTTG1O95997 202 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 GSTM1P09488 218 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 ZSCAN5DPP0CG00 497 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 MATN1P21941 496 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 CD40LGP29965 261 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 MLLT10P55197 1068 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 MS4A2Q01362 244 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 IFITM3Q01628 133 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 FMO1Q01740 532 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 CACNB1Q02641 598 aaPredicted RBP12.68□□□□□ -0.38
USP3-203ENST00000538686 MERTKQ12866 999 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 TRAP1Q12931 704 aaKnown RBP12.68□□□□□ -0.38
USP3-203ENST00000538686 IKQ13123 557 aaPredicted RBP12.68□□□□□ -0.38
USP3-203ENST00000538686 MMRN1Q13201 1228 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 GALNT3Q14435 633 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 GPR162Q16538 588 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 SLC36A3Q495N2 470 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 BTLAQ7Z6A9 289 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 GLRX5Q86SX6 157 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 C12orf56Q8IXR9 622 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 LMO3Q8TAP4 145 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 JPH3Q8WXH2 748 aaPredicted RBP12.68□□□□□ -0.38
USP3-203ENST00000538686 SLC10A4Q96EP9 437 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 ZNF778Q96MU6 729 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 CHID1Q9BWS9 393 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 ZBTB3Q9H5J0 574 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 MCM9Q9NXL9 1143 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 KCND2Q9NZV8 630 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 TRPC5Q9UL62 973 aaPredicted RBP12.68□□□□□ -0.38
USP3-203ENST00000538686 CFL2Q9Y281 166 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 RGPD5Q99666 1765 aa12.68□□□□□ -0.38
USP3-203ENST00000538686 TRPM3Q9HCF6 1732 aaPredicted RBP12.68□□□□□ -0.38
USP3-203ENST00000538686 CICQ96RK0 1608 aaPredicted RBP12.67□□□□□ -0.38
USP3-203ENST00000538686 GLI3P10071 1580 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 TCRBV9S1A1TA0A576 114 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 CLIC2O15247 247 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 TADA2AO75478 443 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 P4HBP07237 508 aaKnown RBP12.67□□□□□ -0.38
USP3-203ENST00000538686 IL12AP29459 219 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 PTPN7P35236 360 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 GABRB2P47870 512 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 PSMD8P48556 350 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 BFSP1Q12934 665 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 NFX1Q12986 1120 aaKnown RBP12.67□□□□□ -0.38
USP3-203ENST00000538686 BFSP2Q13515 415 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 CEACAM7Q14002 265 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 NEDD8Q15843 81 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 MTX3Q5HYI7 312 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 FNBP1LQ5T0N5 605 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 AGAP9Q5VTM2 703 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 MBLAC2Q68D91 279 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 PLA2G4FQ68DD2 849 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 RINT1Q6NUQ1 792 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 KCTD20Q7Z5Y7 419 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 CAND1Q86VP6 1230 aaKnown RBP12.67□□□□□ -0.38
USP3-203ENST00000538686 PHTF2Q8N3S3 785 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 MFSD4AQ8N468 514 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 LINC00469Q8N7U9 141 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 TDRD5Q8NAT2 981 aaKnown RBP12.67□□□□□ -0.38
USP3-203ENST00000538686 GLIS1Q8NBF1 620 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 LRTOMTQ8WZ04 291 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 FIG4Q92562 907 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 METTL2AQ96IZ6 378 aaKnown RBP12.67□□□□□ -0.38
USP3-203ENST00000538686 BTN2A3PQ96KV6 586 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 PDZD7Q9H5P4 517 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 ANKHQ9HCJ1 492 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 SYBUQ9NX95 663 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.67□□□□□ -0.381e-7■□□□□ 10.9
USP3-203ENST00000538686 CDY2AQ9Y6F7 541 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 CDY1Q9Y6F8 540 aa12.67□□□□□ -0.38
USP3-203ENST00000538686 CYP2D7A0A087X1C5 515 aa12.66□□□□□ -0.38
USP3-203ENST00000538686 POTEB3A0JP26 581 aa12.66□□□□□ -0.38
USP3-203ENST00000538686 CENPXA8MT69 81 aa12.66□□□□□ -0.38
USP3-203ENST00000538686 USP17L12C9JPN9 530 aa12.66□□□□□ -0.38
USP3-203ENST00000538686 USP17L21D6R901 530 aa12.66□□□□□ -0.38
USP3-203ENST00000538686 RAD51BO15315 384 aa12.66□□□□□ -0.38
USP3-203ENST00000538686 PDPK1O15530 556 aa12.66□□□□□ -0.38
USP3-203ENST00000538686 PAPSS1O43252 624 aaPredicted RBP12.66□□□□□ -0.38
USP3-203ENST00000538686 KCNJ13O60928 360 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms