RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 VCPIP1Q96JH7 1222 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 IKZF4Q9H2S9 585 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 PIF1Q9H611 641 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 DNPEPQ9ULA0 475 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 PTPRJQ12913 1337 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 MAGEB16A2A368 324 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 BTN3A1O00481 513 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 NR5A2O00482 541 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 KLHL2O95198 593 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 MT-CO1P00395 513 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 KDELR1P24390 212 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 NPY2RP49146 381 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 SARSP49591 514 aaKnown RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 ANXA11P50995 505 aaKnown RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 LRRC36Q1X8D7 754 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 GRAMD4Q6IC98 578 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 CAMKK1Q8N5S9 505 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 BSNDQ8WZ55 320 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 FERD3LQ96RJ6 166 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 RBBP8Q99708 897 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 THTPAQ9BU02 230 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 DUSP16Q9BY84 665 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 TRIM4Q9C037 500 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 SH3BP4Q9P0V3 963 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 ADAM28Q9UKQ2 775 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 ZNF510Q9Y2H8 683 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 ACOT9Q9Y305 439 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 SMIM28A0A1B0GU29 152 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 SIGLEC16A6NMB1 481 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 IGF2BP3O00425 579 aaKnown RBP eCLIP5.46□□□□□ -1.54
LRP6-203ENST00000538239 PARNO95453 639 aaKnown RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 RBP1P09455 135 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 RABGGTBP53611 331 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 MGAT5Q09328 741 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 MAMLD1Q13495 774 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 NT5DC1Q5TFE4 455 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 DAB2IPQ5VWQ8 1189 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 REXO1L1PQ8IX06 675 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 OR10G6Q8NH81 332 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 DTX3LQ8TDB6 740 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 RIPOR3Q96MK2 946 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 SERPINB12Q96P63 405 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 INPP4AQ96PE3 977 aaPredicted RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 PPP1R10Q96QC0 940 aaKnown RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 ASB8Q9H765 288 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 PCDH9Q9HC56 1237 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 DUS2Q9NX74 493 aaKnown RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 KRT87PA6NCN2 255 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 XPO1O14980 1071 aaKnown RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 ZBTB14O43829 449 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 ZNF862O60290 1169 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 MPOP05164 745 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 PDHA1P08559 390 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 TPBGLP0DKB5 382 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 TKTP29401 623 aaKnown RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 MAP2K2P36507 400 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 MRPS5P82675 430 aaKnown RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 DNAJC3Q13217 504 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 GPM6BQ13491 265 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 GRTP1Q5TC63 336 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 FAM46CQ5VWP2 391 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 ARID3BQ8IVW6 561 aaPredicted RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 CENPLQ8N0S6 344 aaPredicted RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 CYP4X1Q8N118 509 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 MCOLN3Q8TDD5 553 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 ACTRT1Q8TDG2 376 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 PANX3Q96QZ0 392 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 SNRNP25Q9BV90 132 aaKnown RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 CDC42EP4Q9H3Q1 356 aaKnown RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 CLDND1Q9NY35 253 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 MTO1Q9Y2Z2 717 aaKnown RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 ETS1P14921 441 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 GOT1P17174 413 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 CORO1AP31146 461 aaKnown RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 GCKP35557 465 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 PEX19P40855 299 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 ELK3P41970 407 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 NUDT2P50583 147 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 CRADDP78560 199 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 SKOR1P84550 965 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 UBXN2BQ14CS0 331 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 ZNF618Q5T7W0 954 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 SIX5Q8N196 739 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.46□□□□□ -1.54
LRP6-203ENST00000538239 DNAJC19Q96DA6 116 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 ABCG4Q9H172 646 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 TAS2R13Q9NYV9 303 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 DERAQ9Y315 318 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 PTCH2Q9Y6C5 1203 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 GSAPA4D1B5 854 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 KLRG2A4D1S0 409 aaPredicted RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 ZNF839A8K0R7 811 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 NUDT14O95848 222 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 PIRTP0C851 137 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 CCNB1P14635 433 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 TFE3P19532 575 aaPredicted RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 TLE2Q04725 743 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 NR6A1Q15406 480 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 CRY1Q16526 586 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 ALFQ53S48 1182 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms