RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 DPYSL2Q16555 572 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 EFHC2Q5JST6 749 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 RABGAP1LQ5R372 815 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 C1orf228Q6PIY5 440 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 ZNF513Q8N8E2 541 aaPredicted RBP13.46□□□□□ -0.25
CHFR-216ENST00000538235 TPCN2Q8NHX9 752 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 FAM71BQ8TC56 605 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 VOPP1Q96AW1 172 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 TBC1D31Q96DN5 1066 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 HHIPQ96QV1 700 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 NELL2Q99435 816 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 DDX50Q9BQ39 737 aaKnown RBP13.46□□□□□ -0.25
CHFR-216ENST00000538235 ZYG11BQ9C0D3 744 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 SLC6A17Q9H1V8 727 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.46□□□□□ -0.25
CHFR-216ENST00000538235 CWC15Q9P013 229 aaKnown RBP13.46□□□□□ -0.25
CHFR-216ENST00000538235 PPARGC1AQ9UBK2 798 aaKnown RBP13.46□□□□□ -0.25
CHFR-216ENST00000538235 SLC12A6Q9UHW9 1150 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 CAPN6Q9Y6Q1 641 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 DOCK9Q9BZ29 2069 aa13.46□□□□□ -0.26
CHFR-216ENST00000538235 GRID2IPA4D2P6 1211 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 C3orf70A6NLC5 250 aaPredicted RBP13.45□□□□□ -0.26
CHFR-216ENST00000538235 H0Y626 953 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 MYO1FO00160 1098 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 RNF103O00237 685 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 ZMPSTE24O75844 475 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 VAV1P15498 845 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 COMTP21964 271 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 MAN1A1P33908 653 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 TNFRSF4P43489 277 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 PXNP49023 591 aaPredicted RBP13.45□□□□□ -0.26
CHFR-216ENST00000538235 FAM182AQ5T1J6 154 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 ERMARDQ5T6L9 678 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 TTC39BQ5VTQ0 682 aaPredicted RBP13.45□□□□□ -0.26
CHFR-216ENST00000538235 RNF219Q5W0B1 726 aaPredicted RBP13.45□□□□□ -0.26
CHFR-216ENST00000538235 ARHGAP12Q8IWW6 846 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 RHOT2Q8IXI1 618 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 SPEM1Q8N4L4 309 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 LRRC57Q8N9N7 239 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 HSPH1Q92598 858 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 KRT35Q92764 455 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 TTC17Q96AE7 1141 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 HERPUD2Q9BSE4 406 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 CIPCQ9C0C6 399 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 TMEM248Q9NWD8 314 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 SPATA6Q9NWH7 488 aaPredicted RBP13.45□□□□□ -0.26
CHFR-216ENST00000538235 ELOVL2Q9NXB9 296 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 THAP10Q9P2Z0 257 aaPredicted RBP13.45□□□□□ -0.26
CHFR-216ENST00000538235 DNAI1Q9UI46 699 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 MMP17Q9ULZ9 603 aa13.45□□□□□ -0.26
CHFR-216ENST00000538235 TP53BP1Q12888 1972 aaPredicted RBP13.44□□□□□ -0.26
CHFR-216ENST00000538235 A0A0A6YYK5 440 aaPredicted RBP13.44□□□□□ -0.26
CHFR-216ENST00000538235 DCLK1O15075 740 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 GALR2O43603 387 aaPredicted RBP13.44□□□□□ -0.26
CHFR-216ENST00000538235 PRPSAP2O60256 369 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 CLDN11O75508 207 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 RNF8O76064 485 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 MOCS3O95396 460 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 MT-CO1P00395 513 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 RHOQP17081 205 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 PLK1P53350 603 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 ARF5P84085 180 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 AMPD2Q01433 879 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 DPYSL3Q14195 570 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 DMC1Q14565 340 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 ACAP1Q15027 740 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 ANGPT1Q15389 498 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 SPA17Q15506 151 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 ARL13BQ3SXY8 428 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 PPP6R3Q5H9R7 873 aaPredicted RBP13.44□□□□□ -0.26
CHFR-216ENST00000538235 RWDD4Q6NW29 188 aaKnown RBP13.44□□□□□ -0.26
CHFR-216ENST00000538235 ARHGAP36Q6ZRI8 547 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 RFX8Q6ZV50 586 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 POLNQ7Z5Q5 900 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 C1orf210Q8IVY1 113 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 AHI1Q8N157 1196 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 RTL3Q8N8U3 475 aaKnown RBP13.44□□□□□ -0.26
CHFR-216ENST00000538235 RAPGEF5Q92565 580 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 RPL10LQ96L21 214 aaKnown RBP13.44□□□□□ -0.26
CHFR-216ENST00000538235 CSPG4P5Q96PW8 444 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 GABRG3Q99928 467 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 FEM1AQ9BSK4 669 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 TMEM245Q9H330 911 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 SLCO3A1Q9UIG8 710 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 PAXBP1Q9Y5B6 917 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 STON1Q9Y6Q2 735 aa13.44□□□□□ -0.26
CHFR-216ENST00000538235 ABCA7Q8IZY2 2146 aa13.43□□□□□ -0.26
CHFR-216ENST00000538235 BTNL10A8MVZ5 291 aa13.43□□□□□ -0.26
CHFR-216ENST00000538235 WASH4PA8MWX3 477 aa13.43□□□□□ -0.26
CHFR-216ENST00000538235 K7ERQ8 282 aa13.43□□□□□ -0.26
CHFR-216ENST00000538235 EEF2KO00418 725 aaKnown RBP13.43□□□□□ -0.26
CHFR-216ENST00000538235 PAPSS2O95340 614 aaPredicted RBP13.43□□□□□ -0.26
CHFR-216ENST00000538235 RHOCP08134 193 aa13.43□□□□□ -0.26
CHFR-216ENST00000538235 ERCC2P18074 760 aa13.43□□□□□ -0.26
CHFR-216ENST00000538235 AMPD1P23109 780 aa13.43□□□□□ -0.26
CHFR-216ENST00000538235 EPHB2P29323 1055 aa13.43□□□□□ -0.26
CHFR-216ENST00000538235 AIF1P55008 147 aa13.43□□□□□ -0.26
CHFR-216ENST00000538235 TPI1P60174 286 aa13.43□□□□□ -0.26
CHFR-216ENST00000538235 MRPS21P82921 87 aaKnown RBP13.43□□□□□ -0.26
CHFR-216ENST00000538235 SRSF5Q13243 272 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms