RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 CERS2Q96G23 380 aa12.43□□□□□ -0.42
CPSF7-218ENST00000537641 GCNAQ96QF7 691 aa12.43□□□□□ -0.42
CPSF7-218ENST00000537641 SHCBP1LQ9BZQ2 653 aa12.43□□□□□ -0.42
CPSF7-218ENST00000537641 SUDS3Q9H7L9 328 aaPredicted RBP12.43□□□□□ -0.42
CPSF7-218ENST00000537641 THEGQ9P2T0 379 aa12.43□□□□□ -0.42
CPSF7-218ENST00000537641 DMTF1Q9Y222 760 aa12.43□□□□□ -0.42
CPSF7-218ENST00000537641 LOC100653049A0A140TA62 436 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 PAPSS1O43252 624 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 KRT34O76011 436 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 CRTAMO95727 393 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 TFAP2AP05549 437 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 APOA4P06727 396 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 POLBP06746 335 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 CYP2C8P10632 490 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 GLUD2P49448 558 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 SESN2P58004 480 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 POU5F1BQ06416 359 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 APOFQ13790 326 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 SLC9B1Q4ZJI4 515 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 FAM182AQ5T1J6 154 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 EFCAB12Q6NXP0 572 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 RBM44Q6ZP01 1051 aaKnown RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 CLEC14AQ86T13 490 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 DCLK2Q8N568 766 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 CPSF7Q8N684 471 aaKnown RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 ZNF781Q8N8C0 355 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 TDRD5Q8NAT2 981 aaKnown RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 KYQ8NBH2 561 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 SLC7A14Q8TBB6 771 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 TRAPPC12Q8WVT3 735 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 IRGQQ8WZA9 623 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 RBM38Q9H0Z9 239 aaKnown RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 RNPEPQ9H4A4 650 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 TCF7L2Q9NQB0 619 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 SYBUQ9NX95 663 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 IGSF9Q9P2J2 1179 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 RIMS3Q9UJD0 308 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 CNOT11Q9UKZ1 510 aaKnown RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 PSAT1Q9Y617 370 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 GMEB1Q9Y692 573 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 USP3Q9Y6I4 520 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 ARHGAP10A1A4S6 786 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 RGSL1A5PLK6 1076 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 E9PBE3 544 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 VILLO15195 856 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 KLHL41O60662 606 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 TRIM13O60858 407 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 OR6B1O95007 311 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 PHKA2P46019 1235 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 NUDT2P50583 147 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 CSE1LP55060 971 aaKnown RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 RFTN1Q14699 578 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 ZNF484Q5JVG2 852 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 ARHGAP17Q68EM7 881 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 PMF1Q6P1K2 205 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 SLC26A9Q7LBE3 791 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 TTC30AQ86WT1 665 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 CDR2LQ86X02 465 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 IFNLR1Q8IU57 520 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 PSTKQ8IV42 348 aaKnown RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 PGAM4Q8N0Y7 254 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 RDH11Q8TC12 318 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 GTF3C2Q8WUA4 911 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 LRRN4Q8WUT4 740 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 SLC35F5Q8WV83 523 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 COPS5Q92905 334 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 NMD3Q96D46 503 aaKnown RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 LENG8Q96PV6 779 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-218ENST00000537641 ERAP1Q9NZ08 941 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 CLIC5Q9NZA1 410 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 LZTS1Q9Y250 596 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 RAP2CQ9Y3L5 183 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 AP4B1Q9Y6B7 739 aa12.42□□□□□ -0.42
CPSF7-218ENST00000537641 PRSS51A0A1B0GVH4 220 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 SLCO1B7G3V0H7 640 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 G3V2L1 256 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 ADCY6O43306 1168 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 ZMPSTE24O75844 475 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 PGM3O95394 542 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 C22orf31O95567 290 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 SPATA31D3P0C874 917 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 ARL4AP40617 200 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 RANBP1P43487 201 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 USP4Q13107 963 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 PEX6Q13608 980 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 FLOT2Q14254 428 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 ZNF423Q2M1K9 1284 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 TBC1D25Q3MII6 688 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 PIGGQ5H8A4 983 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 PPM1JQ5JR12 505 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 PPP1R26Q5T8A7 1209 aaPredicted RBP12.41□□□□□ -0.42
CPSF7-218ENST00000537641 KLC3Q6P597 504 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 SPATA31D4Q6ZUB0 917 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 STRADAQ7RTN6 431 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 MAML3Q96JK9 1138 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 ILKAPQ9H0C8 392 aaPredicted RBP12.41□□□□□ -0.42
CPSF7-218ENST00000537641 OCEL1Q9H607 264 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 ZNF385DQ9H6B1 395 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 LRRC40Q9H9A6 602 aa12.41□□□□□ -0.42
CPSF7-218ENST00000537641 TIMMDC1Q9NPL8 285 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms