RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ANKRD36CQ5JPF3 1778 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 BET1O15155 118 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 MARCH6O60337 910 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 PDE8BO95263 885 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 DLGAP3O95886 979 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 MBL2P11226 248 aaPredicted RBP8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 IMPDH1P20839 514 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 SSTR3P32745 418 aaPredicted RBP8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 HLCSP50747 726 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 MAPK10P53779 464 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 SRP54P61011 504 aaKnown RBP8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 CETN1Q12798 172 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 MERTKQ12866 999 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC12A1Q13621 1099 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 ATG14Q6ZNE5 492 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 TFAP2DQ7Z6R9 452 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC26A11Q86WA9 606 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 C12orf56Q8IXR9 622 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 PPIL6Q8IXY8 311 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 OR5H6Q8NGV6 325 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 PIK3R3Q92569 461 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 HTRA1Q92743 480 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 TOP1MTQ969P6 601 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 ATP6V1E2Q96A05 226 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 PPWD1Q96BP3 646 aaKnown RBP8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 HDAC11Q96DB2 347 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 ZFYVE19Q96K21 471 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 ADI1Q9BV57 179 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 KCNN2Q9H2S1 579 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 SERHL2Q9H4I8 314 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 FBXO8Q9NRD0 319 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 UCKL1Q9NWZ5 548 aa8.7□□□□□ -1.02
SRGAP1-202ENST00000537556 DUOX1Q9NRD9 1551 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 TRIM49D1C9J1S8 452 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 GOLGA8SH3BPF8 625 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 CFLARO15519 480 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 ZNF254O75437 659 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 PIAS1O75925 651 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 CSPG5O95196 566 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 ZSCAN5DPP0CG00 497 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC1A6P48664 564 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 TNNI2P48788 182 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 RHDQ02161 417 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 TARDBPQ13148 414 aaKnown RBP eCLIP8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 GALNT3Q14435 633 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 DSC3Q14574 896 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 MAPK11Q15759 364 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 MTX3Q5HYI7 312 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 HYIQ5T013 277 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 ANGEL2Q5VTE6 544 aaKnown RBP8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 RINT1Q6NUQ1 792 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 DCUN1D2Q6PH85 259 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 NSMFQ6X4W1 530 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 SNX32Q86XE0 403 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 ANKRD13AQ8IZ07 590 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 PHTF2Q8N3S3 785 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 ABTB2Q8N961 1025 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 TDRD5Q8NAT2 981 aaKnown RBP8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 RP9Q8TA86 221 aaKnown RBP8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 SGCDQ92629 289 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 MARVELD3Q96A59 401 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 TM9SF2Q99805 663 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 CCSER2Q9H7U1 834 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC52A2Q9HAB3 445 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 PCDH9Q9HC56 1237 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 TOR4AQ9NXH8 423 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 KCND2Q9NZV8 630 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 ATP6V1HQ9UI12 483 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 PCDHAC2Q9Y5I4 1007 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 RIC1Q4ADV7 1423 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 E7ESA3 106 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 ACOT8O14734 319 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 PSTPIP1O43586 416 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 WEE2P0C1S8 567 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 PPP5CP53041 499 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 RACK1P63244 317 aaKnown RBP8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 MYL7Q01449 175 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 CACNB1Q02641 598 aaPredicted RBP8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 COX10Q12887 443 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 BNIP2Q12982 314 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 PPIL2Q13356 520 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 PXDC1Q5TGL8 231 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 CES4AQ5XG92 561 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 ZNF544Q6NX49 715 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 METTL2BQ6P1Q9 378 aaKnown RBP8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 SLCO6A1Q86UG4 719 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 HORMAD1Q86X24 394 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 CCDC103Q8IW40 242 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 RHOT1Q8IXI2 618 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 REXO1Q8N1G1 1221 aaKnown RBP8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 CADM2Q8N3J6 435 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 PAF1Q8N7H5 531 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 ANKFN1Q8N957 763 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 DTX3Q8N9I9 347 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 PIK3C3Q8NEB9 887 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 BPIFB6Q8NFQ5 453 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 LENG8Q96PV6 779 aaPredicted RBP8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 NARFLQ9H6Q4 476 aa8.69□□□□□ -1.02
SRGAP1-202ENST00000537556 UBE2TQ9NPD8 197 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms