RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 OR6Y1Q8NGX8 325 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 SERAC1Q96JX3 654 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 QKIQ96PU8 341 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLIP1-209ENST00000537178 CBWD1Q9BRT8 395 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 RIBC2Q9H4K1 309 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 SPON1Q9HCB6 807 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 MID1IP1Q9NPA3 183 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 DMGDHQ9UI17 866 aaKnown RBP10.84□□□□□ -0.67
CLIP1-209ENST00000537178 HPSEQ9Y251 543 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 ANKRD6Q9Y2G4 727 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 SH3GLB1Q9Y371 365 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 OR56A5P0C7T3 313 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 ACADMP11310 421 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 TKTL1P51854 596 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 HIRAP54198 1017 aaPredicted RBP10.84□□□□□ -0.67
CLIP1-209ENST00000537178 PTENP60484 403 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 CYP24A1Q07973 514 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 EZH2Q15910 746 aaKnown RBP10.84□□□□□ -0.67
CLIP1-209ENST00000537178 INO80DQ53TQ3 878 aaPredicted RBP10.84□□□□□ -0.67
CLIP1-209ENST00000537178 MZT2BQ6NZ67 158 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 LRRC49Q8IUZ0 686 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 AHI1Q8N157 1196 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 QRFPRQ96P65 431 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 DEFB129Q9H1M3 183 aa10.84□□□□□ -0.67
CLIP1-209ENST00000537178 TLR8Q9NR97 1041 aaKnown RBP10.84□□□□□ -0.67
CLIP1-209ENST00000537178 GPR75-ASB3A0A0A6YYF3 556 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 PTGES3LE9PB15 166 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 ZW10O43264 779 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 NUDT14O95848 222 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 UMPSP11172 480 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 UQCRBP14927 111 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 PTSQ03393 145 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 ACSM2AQ08AH3 577 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 ACSM2BQ68CK6 577 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 NEK5Q6P3R8 708 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 KCNMB4Q86W47 210 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 GATAD2AQ86YP4 633 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 ITFG1Q8TB96 612 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 MED8Q96G25 268 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 APOPT1Q96IL0 206 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 TPD52L3Q96J77 140 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 TMEM237Q96Q45 408 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 FBXO44Q9H4M3 255 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 CMTM6Q9NX76 183 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 A0A096LPK6 155 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 TBKBP1A7MCY6 615 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 OR6B1O95007 311 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 ENO2P09104 434 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-209ENST00000537178 BMP6P22004 513 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 SGCGQ13326 291 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 INTS11Q5TA45 600 aaKnown RBP10.83□□□□□ -0.68
CLIP1-209ENST00000537178 CCDC33Q8N5R6 958 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 EMC1Q8N766 993 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 TAS1R2Q8TE23 839 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 OXNAD1Q96HP4 312 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-209ENST00000537178 MPP4Q96JB8 637 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 REEP1Q9H902 201 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 EPB41L4AQ9HCS5 686 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-209ENST00000537178 SMIM22K7EJ46 135 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 GRIN3BO60391 1043 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 PGAM1P18669 254 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 CCNA2P20248 432 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 PAX7P23759 505 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 HPCAL1P37235 193 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 ELK3P41970 407 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 XRCC4Q13426 336 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 FRG1Q14331 258 aaKnown RBP10.83□□□□□ -0.68
CLIP1-209ENST00000537178 CYP2A13Q16696 494 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 SPANXN3Q5MJ09 141 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 FBXO47Q5MNV8 452 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 ERMARDQ5T6L9 678 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 ABRAQ8N0Z2 381 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 DLG3Q92796 817 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 GPRC5CQ9NQ84 441 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 ENTPD7Q9NQZ7 604 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 UBP1Q9NZI7 540 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 MAPRE3Q9UPY8 281 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 LRP5O75197 1615 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 A0A1B0GUL6 1792 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 RGS14O43566 566 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 NAB1Q13506 487 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 MZT2AQ6P582 158 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 ZDHHC17Q8IUH5 632 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 ADHFE1Q8IWW8 467 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 FNIP1Q8TF40 1166 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 CPNE1Q99829 537 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 RACGAP1Q9H0H5 632 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 SEMA4AQ9H3S1 761 aa10.83□□□□□ -0.68
CLIP1-209ENST00000537178 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-209ENST00000537178 WWP2O00308 870 aa10.82□□□□□ -0.68
CLIP1-209ENST00000537178 ERN1O75460 977 aaKnown RBP10.82□□□□□ -0.68
CLIP1-209ENST00000537178 LBPP18428 481 aa10.82□□□□□ -0.68
CLIP1-209ENST00000537178 FGFR2P21802 821 aa10.82□□□□□ -0.68
CLIP1-209ENST00000537178 CASP4P49662 377 aa10.82□□□□□ -0.68
CLIP1-209ENST00000537178 FAM187BQ17R55 369 aa10.82□□□□□ -0.68
CLIP1-209ENST00000537178 TTI2Q6NXR4 508 aa10.82□□□□□ -0.68
CLIP1-209ENST00000537178 FBXO33Q7Z6M2 555 aa10.82□□□□□ -0.68
CLIP1-209ENST00000537178 ITGB1BP2Q9UKP3 347 aa10.82□□□□□ -0.68
CLIP1-209ENST00000537178 ENTPD4Q9Y227 616 aa10.82□□□□□ -0.68
CLIP1-209ENST00000537178 CSF1RP07333 972 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms