RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 CDK17Q00537 523 aa20.31■□□□□ 0.84
TNFRSF1B-204ENST00000536782 SULT2A1Q06520 285 aa20.31■□□□□ 0.84
TNFRSF1B-204ENST00000536782 EIF4EBP2Q13542 120 aaPredicted RBP20.31■□□□□ 0.84
TNFRSF1B-204ENST00000536782 TAF5Q15542 800 aa20.31■□□□□ 0.84
TNFRSF1B-204ENST00000536782 ARHGAP44Q17R89 818 aa20.31■□□□□ 0.84
TNFRSF1B-204ENST00000536782 TTC39BQ5VTQ0 682 aaPredicted RBP20.31■□□□□ 0.84
TNFRSF1B-204ENST00000536782 SND1Q7KZF4 910 aaKnown RBP eCLIP20.31■□□□□ 0.84
TNFRSF1B-204ENST00000536782 TMPRSS7Q7RTY8 843 aa20.31■□□□□ 0.84
TNFRSF1B-204ENST00000536782 CCAR2Q8N163 923 aaKnown RBP20.31■□□□□ 0.84
TNFRSF1B-204ENST00000536782 STK40Q8N2I9 435 aa20.31■□□□□ 0.84
TNFRSF1B-204ENST00000536782 PTPRN2Q92932 1015 aa20.31■□□□□ 0.84
TNFRSF1B-204ENST00000536782 CCDC86Q9H6F5 360 aaKnown RBP20.31■□□□□ 0.84
TNFRSF1B-204ENST00000536782 RWDD2AQ9UIY3 292 aa20.31■□□□□ 0.84
TNFRSF1B-204ENST00000536782 BECN2A8MW95 431 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 TNFSF14O43557 240 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 GLI1P08151 1106 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 PDGFRAP16234 1089 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 GOT1P17174 413 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 SLC9A1P19634 815 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 C5AR1P21730 350 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 CCR1P32246 355 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 INAVAQ3KP66 663 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 EFHC1Q5JVL4 640 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 RABGAP1LQ5R372 815 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 GBP6Q6ZN66 633 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 DEFB106AQ8N104 65 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 RNF34Q969K3 372 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 PPP1R13BQ96KQ4 1090 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 SLC6A18Q96N87 628 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 SLC2A13Q96QE2 648 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 PRMT1Q99873 361 aaKnown RBP20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 ASNSD1Q9NWL6 643 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 DDIT4Q9NX09 232 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 APEX2Q9UBZ4 518 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 LHX6Q9UPM6 363 aa20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 URB1O60287 2271 aaKnown RBP20.3■□□□□ 0.84
TNFRSF1B-204ENST00000536782 SYNJ2BP-COX16A0A087WUM0 186 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 A0A1B0GVM2 712 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 TCAF2A6NFQ2 919 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 HSF2BPO75031 334 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 STK19P49842 368 aaPredicted RBP20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 CCR5P51681 352 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 OXCT1P55809 520 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 IL9RQ01113 521 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 ELAVL3Q14576 367 aaKnown RBP20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 LRSAM1Q6UWE0 723 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 CIR1Q86X95 450 aaPredicted RBP20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 WDTC1Q8N5D0 677 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 AADATQ8N5Z0 425 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 OR14C36Q8NHC7 312 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 NOX5Q96PH1 765 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 CPXM1Q96SM3 734 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 EBF2Q9HAK2 575 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 AASDHPPTQ9NRN7 309 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 COX16Q9P0S2 106 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 TPX2Q9ULW0 747 aaKnown RBP20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 PCDHGC3Q9UN70 934 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 DOCK9Q9BZ29 2069 aa20.29■□□□□ 0.84
TNFRSF1B-204ENST00000536782 A0A1B0GTQ1 180 aa20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 IL1BP01584 269 aa20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 MZF1P28698 734 aaPredicted RBP20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 CD38P28907 300 aa20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 NUMBP49757 651 aa20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 PLK1P53350 603 aa20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 ADPRHP54922 357 aa20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 APBA1Q02410 837 aa20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 MTA1Q13330 715 aa20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 KCNJ12Q14500 433 aa20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 EXOC3L4Q17RC7 722 aa20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 GALNT15Q8N3T1 639 aa20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 SHC3Q92529 594 aa20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 PPP1R9BQ96SB3 815 aa20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 ELF4Q99607 663 aaPredicted RBP20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 KIAA1468Q9P260 1216 aa20.28■□□□□ 0.84
TNFRSF1B-204ENST00000536782 ARID1BQ8NFD5 2236 aaPredicted RBP20.27■□□□□ 0.84
TNFRSF1B-204ENST00000536782 ASXL3Q9C0F0 2248 aa20.27■□□□□ 0.84
TNFRSF1B-204ENST00000536782 C10orf142B7Z368 130 aa20.27■□□□□ 0.84
TNFRSF1B-204ENST00000536782 GRAP2O75791 330 aa20.27■□□□□ 0.84
TNFRSF1B-204ENST00000536782 WNT1P04628 370 aa20.27■□□□□ 0.84
TNFRSF1B-204ENST00000536782 SNX16P57768 344 aa20.27■□□□□ 0.84
TNFRSF1B-204ENST00000536782 PTK2Q05397 1052 aa20.27■□□□□ 0.84
TNFRSF1B-204ENST00000536782 OR6B2Q6IFH4 312 aa20.27■□□□□ 0.84
TNFRSF1B-204ENST00000536782 FBXL22Q6P050 247 aa20.27■□□□□ 0.84
TNFRSF1B-204ENST00000536782 C11orf57Q6ZUT1 292 aaPredicted RBP20.27■□□□□ 0.84
TNFRSF1B-204ENST00000536782 PASD1Q8IV76 773 aa20.27■□□□□ 0.84
TNFRSF1B-204ENST00000536782 RPRD1AQ96P16 312 aaPredicted RBP20.27■□□□□ 0.84
TNFRSF1B-204ENST00000536782 SPAG5Q96R06 1193 aa20.27■□□□□ 0.84
TNFRSF1B-204ENST00000536782 FTSJ1Q9UET6 329 aa20.27■□□□□ 0.84
TNFRSF1B-204ENST00000536782 TBC1D3DA0A087WVF3 549 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 TBC1D3IA0A087WXS9 549 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 TBC1D3EA0A087X179 549 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 TBC1D3KA0A087X1G2 549 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 GTPBP10A4D1E9 387 aaKnown RBP20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 TBC1D3FA6NER0 549 aaPredicted RBP20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 TBC1D3LB9A6J9 549 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 TBC1D3HP0C7X1 549 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 VAV1P15498 845 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 PON1P27169 355 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 CENPCQ03188 943 aa20.26■□□□□ 0.83
TNFRSF1B-204ENST00000536782 NME3Q13232 169 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms