RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 HSPA12BQ96MM6 686 aa14.69□□□□□ -0.06
UBE3B-206ENST00000536398 FEM1AQ9BSK4 669 aa14.69□□□□□ -0.06
UBE3B-206ENST00000536398 GPR174Q9BXC1 333 aa14.69□□□□□ -0.06
UBE3B-206ENST00000536398 TTYH3Q9C0H2 523 aa14.69□□□□□ -0.06
UBE3B-206ENST00000536398 HAUS4Q9H6D7 363 aa14.69□□□□□ -0.06
UBE3B-206ENST00000536398 OR51B4Q9Y5P0 310 aa14.69□□□□□ -0.06
UBE3B-206ENST00000536398 PLXND1Q9Y4D7 1925 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 LNP1A1A4G5 178 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 TMCO5BA8MYB1 307 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 E9PAM4 449 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 SLC30A4O14863 429 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 KHNYNO15037 678 aaKnown RBP14.68□□□□□ -0.06
UBE3B-206ENST00000536398 CLDN11O75508 207 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 SRPRAP08240 638 aaKnown RBP14.68□□□□□ -0.06
UBE3B-206ENST00000536398 ACADMP11310 421 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 SKILP12757 684 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 TNFAIP3P21580 790 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 SDC4P31431 198 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 CDH4P55283 916 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 ASIC2Q16515 512 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 HNRNPA1L2Q32P51 320 aaKnown RBP14.68□□□□□ -0.06
UBE3B-206ENST00000536398 SPDYCQ5MJ68 293 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 STPG1Q5TH74 334 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 RNF219Q5W0B1 726 aaPredicted RBP14.68□□□□□ -0.06
UBE3B-206ENST00000536398 TFAP2DQ7Z6R9 452 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 SYT12Q8IV01 421 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 MCOLN2Q8IZK6 566 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 C3orf20Q8ND61 904 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 CENPIQ92674 756 aaPredicted RBP14.68□□□□□ -0.06
UBE3B-206ENST00000536398 HAPLN3Q96S86 360 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 SELENOOQ9BVL4 669 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 MYO6Q9UM54 1294 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 TBC1D30Q9Y2I9 924 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 NUP205Q92621 2012 aa14.68□□□□□ -0.06
UBE3B-206ENST00000536398 SIGLEC16A6NMB1 481 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 FAM72CH0Y354 149 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 IGLV3-19P01714 112 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 CALB1P05937 261 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 C7P10643 843 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 PTMSP20962 102 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 GPD1P21695 349 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 RRM1P23921 792 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 ACSL1P33121 698 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 ADRA1BP35368 520 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 PBX1P40424 430 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 PTPN9P43378 593 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 HDAC4P56524 1084 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 GSCP56915 257 aaPredicted RBP14.67□□□□□ -0.06
UBE3B-206ENST00000536398 UBASH3AP57075 661 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 RPL7AP62424 266 aaKnown RBP14.67□□□□□ -0.06
UBE3B-206ENST00000536398 OGDHQ02218 1023 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 C1QBPQ07021 282 aaKnown RBP14.67□□□□□ -0.06
UBE3B-206ENST00000536398 MTA1Q13330 715 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 SLC12A1Q13621 1099 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 TRIM61Q5EBN2 209 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 PPP1R15BQ5SWA1 713 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 FAM72AQ5TYM5 149 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 SFMBT2Q5VUG0 894 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 PEAR1Q5VY43 1037 aaPredicted RBP14.67□□□□□ -0.06
UBE3B-206ENST00000536398 FAM72DQ6L9T8 149 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 LRRC31Q6UY01 552 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 FAM72BQ86X60 149 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 STK40Q8N2I9 435 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 CCDC185Q8N715 623 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 FAM172AQ8WUF8 416 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 PTPRN2Q92932 1015 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 FAM129BQ96TA1 746 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 PSMB7Q99436 277 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 RTKNQ9BST9 563 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 EDEM2Q9BV94 578 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 RSPH9Q9H1X1 276 aaPredicted RBP14.67□□□□□ -0.06
UBE3B-206ENST00000536398 AIPL1Q9NZN9 384 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 ZNF212Q9UDV6 495 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 PAXBP1Q9Y5B6 917 aa14.67□□□□□ -0.06
UBE3B-206ENST00000536398 IGLV3-10A0A075B6K4 115 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 A0A0D9SEW6 157 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 C4orf47A7E2U8 309 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 ATMINO43313 823 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-206ENST00000536398 FOXD2O60548 495 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-206ENST00000536398 SNAP91O60641 907 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 MT-CO1P00395 513 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 RHOCP08134 193 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 CCDC172P0C7W6 258 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 GLDCP23378 1020 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 OXTRP30559 389 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 LIMK1P53667 647 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 ARID5BQ14865 1188 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 DNAJC24Q6P3W2 148 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 MMAAQ8IVH4 418 aaKnown RBP14.66□□□□□ -0.06
UBE3B-206ENST00000536398 RGL4Q8IZJ4 473 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 KDM1BQ8NB78 822 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 FRS2Q8WU20 508 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 CPLX3Q8WVH0 158 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 MCEEQ96PE7 176 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 NUP58Q9BVL2 599 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 MUC3BQ9H195 1237 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 C6orf106Q9H6K1 298 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-206ENST00000536398 SERGEFQ9UGK8 458 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 VPS28Q9UK41 221 aa14.66□□□□□ -0.06
UBE3B-206ENST00000536398 TNRC6BQ9UPQ9 1833 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms