RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 TRHDEQ9UKU6 1024 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 CDY2AQ9Y6F7 541 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 CDY1Q9Y6F8 540 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 WASF2Q9Y6W5 498 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 ZNF638Q14966 1978 aaKnown RBP16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 ZCWPW2A0A1B0GU75 182 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 C9IYK1 514 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 LINGO3P0C6S8 592 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 FAM200BP0CF97 657 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 ACAT1P24752 427 aaKnown RBP16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 GJA9P57773 515 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 ITGA9Q13797 1035 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 ANKRD20A4Q4UJ75 823 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 WSCD1Q658N2 575 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 KCTD11Q693B1 232 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 TMEM154Q6P9G4 183 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 DNAAF3Q8N9W5 541 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 RNF169Q8NCN4 708 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 ZNF669Q96BR6 464 aaPredicted RBP16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 PGAP3Q96FM1 320 aaPredicted RBP16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 SYT15Q9BQS2 421 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 MED10Q9BTT4 135 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 PCDHB12Q9Y5F1 795 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 PCNTO95613 3336 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 EIF4E1BA6NMX2 242 aaKnown RBP16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 NRP1O14786 923 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 ARRB2P32121 409 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 EPHX2P34913 555 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 NPY2RP49146 381 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 MAP3K7CLP57077 242 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 TPI1P60174 286 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 ARL13BQ3SXY8 428 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 ARRDC4Q8NCT1 418 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 SMG8Q8ND04 991 aaKnown RBP16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 SREK1Q8WXA9 508 aaKnown RBP16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 VAT1Q99536 393 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 GORASP1Q9BQQ3 440 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 CNGB3Q9NQW8 809 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 ZNF358Q9NW07 568 aa16.39■□□□□ 0.21
CHMP1A-202ENST00000535997 TSC2P49815 1807 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 ZBTB24O43167 697 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 CYP2B6P20813 491 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 GTF2A2P52657 109 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 ZNF135P52742 658 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 CRYBB1P53674 252 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 SLC25A3Q00325 362 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 MFSD10Q14728 455 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 METTL21CQ5VZV1 264 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 PLEKHH3Q7Z736 793 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 CMC1Q7Z7K0 106 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 ADGRG6Q86SQ4 1221 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 NDE1Q9NXR1 346 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 DDX43Q9NXZ2 648 aaKnown RBP16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 RRN3Q9NYV6 651 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 ARHGAP42A6NI28 874 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 YJEFN3A6XGL0 299 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 TIMM44O43615 452 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 CCNT2O60583 730 aaKnown RBP16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 USP12O75317 370 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 F9P00740 461 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 HADHAP40939 763 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 DAOAP59103 153 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 OLIG2Q13516 323 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 PDPK2PQ6A1A2 396 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 ITPRIPL1Q6GPH6 555 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 CLEC14AQ86T13 490 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 TNS4Q8IZW8 715 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 PPP1R13LQ8WUF5 828 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 HDAC11Q96DB2 347 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 AGAP2Q99490 1192 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 ULBP1Q9BZM6 244 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 IL22Q9GZX6 179 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 GBA3Q9H227 469 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 SCOCQ9UIL1 159 aa16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 GNEQ9Y223 722 aaKnown RBP16.38■□□□□ 0.21
CHMP1A-202ENST00000535997 A0A096LPK6 155 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 CCL15-CCL14A0A0B4J2E2 113 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 TMEM114B3SHH9 223 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 I6L893 689 aaPredicted RBP16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 AP3B1O00203 1094 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 TREHO43280 583 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 CCL15Q16663 113 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 GSTA3Q16772 222 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 HSP90AA5PQ58FG0 334 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 FSCBQ5H9T9 825 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 KIAA0319Q5VV43 1072 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 PGM2L1Q6PCE3 622 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 EPGNQ6UW88 154 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 ANKRD23Q86SG2 305 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 PLD6Q8N2A8 252 aaKnown RBP16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 URGCPQ8TCY9 931 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 ACTRT2Q8TDY3 377 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 GATA6Q92908 595 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 PPP1R10Q96QC0 940 aaKnown RBP16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 ANLNQ9NQW6 1124 aa16.37■□□□□ 0.21
CHMP1A-202ENST00000535997 G3V2L1 256 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 PTGESO14684 152 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 TRIM13O60858 407 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 H2AFYO75367 372 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 NCAM1P13591 858 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms