RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 GRAMD4Q6IC98 578 aa13.08□□□□□ -0.32
DDB1-207ENST00000535967 RFWD3Q6PCD5 774 aa13.08□□□□□ -0.32
DDB1-207ENST00000535967 C12orf40Q86WS4 652 aa13.08□□□□□ -0.32
DDB1-207ENST00000535967 LGI2Q8N0V4 545 aa13.08□□□□□ -0.32
DDB1-207ENST00000535967 PHTF2Q8N3S3 785 aa13.08□□□□□ -0.32
DDB1-207ENST00000535967 SYNPOQ8N3V7 929 aa13.08□□□□□ -0.32
DDB1-207ENST00000535967 CCDC26Q8TAB7 109 aa13.08□□□□□ -0.32
DDB1-207ENST00000535967 RFFLQ8WZ73 363 aa13.08□□□□□ -0.32
DDB1-207ENST00000535967 C1orf74Q96LT6 269 aa13.08□□□□□ -0.32
DDB1-207ENST00000535967 DNAJC17Q9NVM6 304 aaKnown RBP13.08□□□□□ -0.32
DDB1-207ENST00000535967 CTTNBP2NLQ9P2B4 639 aa13.08□□□□□ -0.32
DDB1-207ENST00000535967 DEC1Q9P2X7 70 aa13.08□□□□□ -0.32
DDB1-207ENST00000535967 TSR3Q9UJK0 312 aaKnown RBP13.08□□□□□ -0.32
DDB1-207ENST00000535967 FBXO10Q9UK96 956 aa13.08□□□□□ -0.32
DDB1-207ENST00000535967 RALYQ9UKM9 306 aaKnown RBP13.08□□□□□ -0.32
DDB1-207ENST00000535967 SLC27A6Q9Y2P4 619 aa13.08□□□□□ -0.32
DDB1-207ENST00000535967 EPN1Q9Y6I3 576 aaPredicted RBP13.08□□□□□ -0.32
DDB1-207ENST00000535967 GOLGA6L7A0A1B0GV03 622 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 A0A1B0GVM2 712 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 TCAF2A6NFQ2 919 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 TSPAN3O60637 253 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 MTA2O94776 668 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 ADRA1BP35368 520 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 MAGEA1P43355 309 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 PXNP49023 591 aaPredicted RBP13.07□□□□□ -0.32
DDB1-207ENST00000535967 GALK1P51570 392 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 KDSRQ06136 332 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 CCINQ13939 588 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 TCEAL1Q15170 157 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 C5orf22Q49AR2 442 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 FSTL4Q6MZW2 842 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 LONP2Q86WA8 852 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 TXLNBQ8N3L3 684 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 TERB1Q8NA31 727 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 ANLNQ9NQW6 1124 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 ARHGEF4Q9NR80 690 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 POLR3BQ9NW08 1133 aaPredicted RBP13.07□□□□□ -0.32
DDB1-207ENST00000535967 HS3ST4Q9Y661 456 aa13.07□□□□□ -0.32
DDB1-207ENST00000535967 CKAP5Q14008 2032 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 IGLV3-10A0A075B6K4 115 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 A0A0A0MRY4 1105 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 I6L893 689 aaPredicted RBP13.06□□□□□ -0.32
DDB1-207ENST00000535967 MYO1FO00160 1098 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 NRDCO43847 1150 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 TBL1XO60907 577 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 LRCH4O75427 683 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 LUC7L3O95232 432 aaKnown RBP13.06□□□□□ -0.32
DDB1-207ENST00000535967 KAT7O95251 611 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 MAN1A1P33908 653 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 PCK1P35558 622 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 GRIA2P42262 883 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 SGSHP51688 502 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 AUHQ13825 339 aaKnown RBP13.06□□□□□ -0.32
DDB1-207ENST00000535967 RAB6CQ53S08 254 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 EFHC2Q5JST6 749 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 LRRC31Q6UY01 552 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 RAD9BQ6WBX8 426 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 CHST9Q7L1S5 443 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 SLFN11Q7Z7L1 901 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 PSTKQ8IV42 348 aaKnown RBP13.06□□□□□ -0.32
DDB1-207ENST00000535967 CCDC117Q8IWD4 279 aaPredicted RBP13.06□□□□□ -0.32
DDB1-207ENST00000535967 CCDC185Q8N715 623 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 NAT16Q8N8M0 369 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 BHMTQ93088 406 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 RPRD1AQ96P16 312 aaPredicted RBP13.06□□□□□ -0.32
DDB1-207ENST00000535967 TRIM7Q9C029 511 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 RAB6CQ9H0N0 254 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 OSBPL2Q9H1P3 480 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 PLK2Q9NYY3 685 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 PCDHA13Q9Y5I0 950 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 ABCA7Q8IZY2 2146 aa13.06□□□□□ -0.32
DDB1-207ENST00000535967 A0A0A6YYK5 440 aaPredicted RBP13.05□□□□□ -0.32
DDB1-207ENST00000535967 PRPSAP2O60256 369 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 HTR7P34969 479 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 ARHGAP25P42331 645 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 TNFRSF4P43489 277 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 SLC6A11P48066 632 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 HADHBP55084 474 aaKnown RBP13.05□□□□□ -0.32
DDB1-207ENST00000535967 OXCT1P55809 520 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 RPS24P62847 133 aaKnown RBP13.05□□□□□ -0.32
DDB1-207ENST00000535967 KRT83P78385 493 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 CDH18Q13634 790 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 E2F5Q15329 346 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 N4BP2L1Q5TBK1 243 aaPredicted RBP13.05□□□□□ -0.32
DDB1-207ENST00000535967 MANEALQ5VSG8 457 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 NAIF1Q69YI7 327 aaPredicted RBP13.05□□□□□ -0.32
DDB1-207ENST00000535967 FBXL22Q6P050 247 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 SCYL2Q6P3W7 929 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 ANKS1BQ7Z6G8 1248 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 MFN1Q8IWA4 741 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 ZNF683Q8IZ20 524 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.05□□□□□ -0.32
DDB1-207ENST00000535967 SLC35G2Q8TBE7 412 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 WFIKKN2Q8TEU8 576 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 P2RY11Q96G91 374 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 CALR3Q96L12 384 aaKnown RBP13.05□□□□□ -0.32
DDB1-207ENST00000535967 SIK2Q9H0K1 926 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 SMOC1Q9H4F8 434 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 RETREG1Q9H6L5 497 aa13.05□□□□□ -0.32
DDB1-207ENST00000535967 PPARGC1AQ9UBK2 798 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms