RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 RAD54BQ9Y620 910 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 SPTBN4Q9H254 2564 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 hCG_1818297A0A087WSY0 165 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 E2F8A0AVK6 867 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 TARSL2A2RTX5 802 aaKnown RBP11.11□□□□□ -0.63
UBE3B-205ENST00000535900 C2orf78A6NCI8 922 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 PRR5-ARHGAP8B1AHC4 643 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 MSI1O43347 362 aaKnown RBP11.11□□□□□ -0.63
UBE3B-205ENST00000535900 SRGAP2O75044 1071 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 PAGE1O75459 146 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 STC2O76061 302 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 CKMP06732 381 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 MCM3P25205 808 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 HOXC13P31276 330 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 NR2C2P49116 596 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 ATXN1P54253 815 aaKnown RBP11.11□□□□□ -0.63
UBE3B-205ENST00000535900 ARHGAP8P85298 464 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 SIM2Q14190 667 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-205ENST00000535900 GAS6Q14393 721 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 LONRF2Q1L5Z9 754 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 ATP13A4Q4VNC1 1196 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 TXNRD3NBQ6F5E7 133 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 MFSD7Q6UXD7 560 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 MAMSTRQ6ZN01 415 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 BBS12Q6ZW61 710 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 LONP2Q86WA8 852 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 MAB21L3Q8N8X9 362 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-205ENST00000535900 RNF25Q96BH1 459 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-205ENST00000535900 RNF157Q96PX1 679 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 PSMB7Q99436 277 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 CALN1Q9BXU9 219 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 SLC46A2Q9BY10 475 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 RNF38Q9H0F5 515 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 CATSPERBQ9H7T0 1116 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 FEZ2Q9UHY8 353 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-205ENST00000535900 NUDT5Q9UKK9 219 aa11.11□□□□□ -0.63
UBE3B-205ENST00000535900 EP300Q09472 2414 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-205ENST00000535900 APOC4-APOC2K7ER74 178 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 PDE2AO00408 941 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-205ENST00000535900 EEF2KO00418 725 aaKnown RBP11.1□□□□□ -0.63
UBE3B-205ENST00000535900 KRIT1O00522 736 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 ZNF185O15231 689 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 ACSL4O60488 711 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 PAPSS2O95340 614 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-205ENST00000535900 APOC2P02655 101 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 TGM2P21980 687 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 TPI1P60174 286 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 DMWDQ09019 674 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 SPEM2Q0P670 501 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 KLF1Q13351 362 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-205ENST00000535900 ZNF211Q13398 564 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-205ENST00000535900 CCINQ13939 588 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 C5orf22Q49AR2 442 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 RAB6CQ53S08 254 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 ANKRD20A8PQ5CZ79 823 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 PPP6R3Q5H9R7 873 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-205ENST00000535900 ADGRF1Q5T601 910 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 MANEALQ5VSG8 457 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 TTC39BQ5VTQ0 682 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-205ENST00000535900 SLC9A4Q6AI14 798 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 TRIM68Q6AZZ1 485 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 DRICH1Q6PGQ1 229 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-205ENST00000535900 RFX8Q6ZV50 586 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 HTR3DQ70Z44 454 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 CEP68Q76N32 757 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 SYNPOQ8N3V7 929 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 LZTR1Q8N653 840 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 ARL14EPQ8N8R7 260 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-205ENST00000535900 OTUB2Q96DC9 234 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 TBC1D31Q96DN5 1066 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 ZFRQ96KR1 1074 aaKnown RBP11.1□□□□□ -0.63
UBE3B-205ENST00000535900 CSPG4P5Q96PW8 444 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 KCTD15Q96SI1 283 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-205ENST00000535900 RAB6CQ9H0N0 254 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 EBF3Q9H4W6 596 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 TDP1Q9NUW8 608 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 TBC1D14Q9P2M4 693 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 CCL26Q9Y258 94 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 CPQQ9Y646 472 aa11.1□□□□□ -0.63
UBE3B-205ENST00000535900 HELZP42694 1942 aaKnown RBP11.09□□□□□ -0.63
UBE3B-205ENST00000535900 F5P12259 2224 aa11.09□□□□□ -0.63
UBE3B-205ENST00000535900 IGLV3-10A0A075B6K4 115 aa11.09□□□□□ -0.63
UBE3B-205ENST00000535900 WASH4PA8MWX3 477 aa11.09□□□□□ -0.63
UBE3B-205ENST00000535900 F5H5T6 163 aa11.09□□□□□ -0.63
UBE3B-205ENST00000535900 K7ESF4 209 aa11.09□□□□□ -0.63
UBE3B-205ENST00000535900 SLC9A3R1O14745 358 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-205ENST00000535900 APOL1O14791 398 aa11.09□□□□□ -0.63
UBE3B-205ENST00000535900 DAPK3O43293 454 aa11.09□□□□□ -0.63
UBE3B-205ENST00000535900 RETP07949 1114 aa11.09□□□□□ -0.63
UBE3B-205ENST00000535900 IL4RP24394 825 aa11.09□□□□□ -0.63
UBE3B-205ENST00000535900 CORO1AP31146 461 aaKnown RBP11.09□□□□□ -0.63
UBE3B-205ENST00000535900 CNR2P34972 360 aa11.09□□□□□ -0.63
UBE3B-205ENST00000535900 SERPINB6P35237 376 aa11.09□□□□□ -0.63
UBE3B-205ENST00000535900 CHKAP35790 457 aa11.09□□□□□ -0.63
UBE3B-205ENST00000535900 IFNAR2P48551 515 aa11.09□□□□□ -0.63
UBE3B-205ENST00000535900 GRSF1Q12849 480 aaKnown RBP eCLIP11.09□□□□□ -0.63
UBE3B-205ENST00000535900 SRSF5Q13243 272 aaKnown RBP11.09□□□□□ -0.63
UBE3B-205ENST00000535900 RUNX3Q13761 415 aa11.09□□□□□ -0.63
UBE3B-205ENST00000535900 DPYSQ14117 519 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms