RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 DTX4Q9Y2E6 619 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 A0A0G2JK05 382 aa5.64□□□□□ -1.51
PRKDC-205ENST00000535375 HMX3A6NHT5 357 aa5.64□□□□□ -1.51
PRKDC-205ENST00000535375 A6NNC1 897 aa5.64□□□□□ -1.51
PRKDC-205ENST00000535375 PROB1E7EW31 1015 aa5.64□□□□□ -1.51
PRKDC-205ENST00000535375 SERPINA4P29622 427 aa5.64□□□□□ -1.51
PRKDC-205ENST00000535375 OAZ1P54368 228 aa5.64□□□□□ -1.51
PRKDC-205ENST00000535375 LINC00205P59089 165 aa5.64□□□□□ -1.51
PRKDC-205ENST00000535375 GALNTL6Q49A17 601 aa5.64□□□□□ -1.51
PRKDC-205ENST00000535375 TMEM200AQ86VY9 491 aa5.64□□□□□ -1.51
PRKDC-205ENST00000535375 ENAHQ8N8S7 591 aaPredicted RBP5.64□□□□□ -1.51
PRKDC-205ENST00000535375 RUBCNQ92622 972 aa5.64□□□□□ -1.51
PRKDC-205ENST00000535375 TMLHEQ9NVH6 421 aa5.64□□□□□ -1.51
PRKDC-205ENST00000535375 ARL15Q9NXU5 204 aa5.64□□□□□ -1.51
PRKDC-205ENST00000535375 KCNJ18B7U540 433 aa5.63□□□□□ -1.51
PRKDC-205ENST00000535375 IKBKBO14920 756 aa5.63□□□□□ -1.51
PRKDC-205ENST00000535375 HNRNPRO43390 633 aaKnown RBP5.63□□□□□ -1.51
PRKDC-205ENST00000535375 ATG13O75143 517 aa5.63□□□□□ -1.51
PRKDC-205ENST00000535375 TOMM40O96008 361 aa5.63□□□□□ -1.51
PRKDC-205ENST00000535375 HOXB9P17482 250 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-205ENST00000535375 TNFRSF1BP20333 461 aa5.63□□□□□ -1.51
PRKDC-205ENST00000535375 ALKBH1Q13686 389 aaKnown RBP5.63□□□□□ -1.51
PRKDC-205ENST00000535375 PDCD2Q16342 344 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-205ENST00000535375 NUGGCQ68CJ6 796 aa5.63□□□□□ -1.51
PRKDC-205ENST00000535375 RRAGAQ7L523 313 aa5.63□□□□□ -1.51
PRKDC-205ENST00000535375 SAMD14Q8IZD0 417 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-205ENST00000535375 NPAS1Q99742 590 aa5.63□□□□□ -1.51
PRKDC-205ENST00000535375 PAGR1Q9BTK6 254 aa5.63□□□□□ -1.51
PRKDC-205ENST00000535375 TAF1DQ9H5J8 278 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-205ENST00000535375 SPAG4Q9NPE6 437 aa5.63□□□□□ -1.51
PRKDC-205ENST00000535375 GRM8O00222 908 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 KCNAB3O43448 404 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 ITGB6P18564 788 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 POLD2P49005 469 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 PNLIPRP1P54315 467 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 CDK18Q07002 472 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 FOXO1Q12778 655 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 TTC22Q5TAA0 569 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 TTLL5Q6EMB2 1281 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 LIN54Q6MZP7 749 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 ZNF549Q6P9A3 640 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 ZNF517Q6ZMY9 492 aaPredicted RBP5.62□□□□□ -1.51
PRKDC-205ENST00000535375 SYNE3Q6ZMZ3 975 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 RTL10Q7L3V2 364 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 CCDC25Q86WR0 208 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 ZDHHC17Q8IUH5 632 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 CACNA2D3Q8IZS8 1091 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 KCNJ9Q92806 393 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 TRIM31Q9BZY9 425 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 LZTS1Q9Y250 596 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 PKP3Q9Y446 797 aa5.62□□□□□ -1.51
PRKDC-205ENST00000535375 H0YGN5 161 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 NEURL1O76050 574 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 HEXIM1O94992 359 aaKnown RBP5.61□□□□□ -1.51
PRKDC-205ENST00000535375 ALPLP05186 524 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 FGF2P09038 288 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 PKMP14618 531 aaKnown RBP5.61□□□□□ -1.51
PRKDC-205ENST00000535375 KLRC2P26717 231 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 GSTM2P28161 218 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 SLC16A2P36021 539 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 CYP2J2P51589 502 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 P2RX3P56373 397 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 RHBDL3P58872 404 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 TIGD6Q17RP2 521 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 DGAT2L7PQ6IED9 249 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 CCDC174Q6PII3 467 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 SLC30A9Q6PML9 568 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 KIAA1324Q6UXG2 1013 aaKnown RBP5.61□□□□□ -1.51
PRKDC-205ENST00000535375 C9orf47Q6ZRZ4 202 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 FAM185AQ8N0U4 392 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 SLC25A41Q8N5S1 370 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 FAM110DQ8TAY7 271 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-205ENST00000535375 SLC2A12Q8TD20 617 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 OTUD7AQ8TE49 926 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-205ENST00000535375 ARRDC3Q96B67 414 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-205ENST00000535375 RBM38Q9H0Z9 239 aaKnown RBP5.61□□□□□ -1.51
PRKDC-205ENST00000535375 MAGEH1Q9H213 219 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 TBC1D14Q9P2M4 693 aa5.61□□□□□ -1.51
PRKDC-205ENST00000535375 TCRBV7S3A2A0A539 114 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 H0Y3Z8 333 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 MDM4O15151 490 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 SEPT4O43236 478 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 IFNA2P01563 188 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 HLA-DQA2P01906 255 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 PRPH2P23942 346 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 TKTP29401 623 aaKnown RBP5.6□□□□□ -1.51
PRKDC-205ENST00000535375 RAPGEF1Q13905 1077 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 ENTPD8Q5MY95 495 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 KDELC2Q7Z4H8 507 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 VPS52Q8N1B4 723 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 DPP10Q8N608 796 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 FSIP1Q8NA03 581 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 OR6Y1Q8NGX8 325 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 STT3BQ8TCJ2 826 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 GOLGA1Q92805 767 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 SLC39A13Q96H72 371 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 ZNF304Q9HCX3 659 aa5.6□□□□□ -1.51
PRKDC-205ENST00000535375 PNRC2Q9NPJ4 139 aaKnown RBP5.6□□□□□ -1.51
PRKDC-205ENST00000535375 RNF146Q9NTX7 359 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms