RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 FBXO21O94952 628 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 GJB1P08034 283 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 THRAP10827 490 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 C15orf59Q2T9L4 293 aaPredicted RBP12.86□□□□□ -0.35
SPG11-203ENST00000535302 IZUMO2Q6UXV1 221 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 MOB2Q70IA6 237 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 HPS6Q86YV9 775 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 FAM45AQ8TCE6 357 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 PAIP1Q9H074 479 aaKnown RBP12.86□□□□□ -0.35
SPG11-203ENST00000535302 RIOX1Q9H6W3 641 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 DMGDHQ9UI17 866 aaKnown RBP12.86□□□□□ -0.35
SPG11-203ENST00000535302 IFNA16P05015 189 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 MAGEA10P43363 369 aaPredicted RBP12.86□□□□□ -0.35
SPG11-203ENST00000535302 CBFBQ13951 182 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 OTOP1Q7RTM1 612 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 KCNK18Q7Z418 384 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 S100A13Q99584 98 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 PPCSQ9HAB8 311 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 MID1IP1Q9NPA3 183 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 SLC35C2Q9NQQ7 365 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 A0A0U1RQJ8 604 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 E5RJQ4 531 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 RARRES1P49788 294 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 ACVR2BQ13705 512 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 GRIK5Q16478 980 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 ZNF470Q6ECI4 717 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 ZBTB49Q6ZSB9 765 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 C2orf73Q8N5S3 287 aaPredicted RBP12.86□□□□□ -0.35
SPG11-203ENST00000535302 ARMCX1Q9P291 453 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 HPSEQ9Y251 543 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 NCOA3Q9Y6Q9 1424 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 H3BQF6 201 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 YBX3P16989 372 aaKnown RBP eCLIP12.86□□□□□ -0.352e-6■□□□□ 10.6
SPG11-203ENST00000535302 SLC26A11Q86WA9 606 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 SPATA20Q8TB22 786 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 TBL1YQ9BQ87 522 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 DNPEPQ9ULA0 475 aa12.86□□□□□ -0.35
SPG11-203ENST00000535302 CCDC154A6NI56 674 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 AREL1O15033 823 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 MYCBPAPQ8TBZ2 947 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 EFCAB1Q9HAE3 211 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 NTRK1P04629 796 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 IL1R1P14778 569 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 NFKB1P19838 968 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 PSEN2P49810 448 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 HIRAP54198 1017 aaPredicted RBP12.85□□□□□ -0.35
SPG11-203ENST00000535302 NTRK3Q16288 839 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 FSCN1Q16658 493 aaKnown RBP12.85□□□□□ -0.35
SPG11-203ENST00000535302 RNF145Q96MT1 663 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 POMKQ9H5K3 350 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 TAS2R14Q9NYV8 317 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 PNMA8CA0A1B0GUJ8 204 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 ATP9AO75110 1047 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 PIAS1O75925 651 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 SCNN1GP51170 649 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 CYB5D1Q6P9G0 228 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 LPCAT2Q7L5N7 544 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 KAT5Q92993 513 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 ADAM2Q99965 735 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 KLHL4Q9C0H6 718 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 STK39Q9UEW8 545 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 ZNF112Q9UJU3 913 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 CEMIPQ8WUJ3 1361 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 FAM220BPB1ANY3 271 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 SCTRP47872 440 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 SLC27A1Q6PCB7 646 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 MFSD7Q6UXD7 560 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 CASP12Q6UXS9 341 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 TAF8Q7Z7C8 310 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 GAD1Q99259 594 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 DPY30Q9C005 99 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 MTFR1LQ9H019 292 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 HOXA2O43364 376 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 ACSL4O60488 711 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 PGK1P00558 417 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 EPORP19235 508 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 CCL23P55773 120 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 C1DQ13901 141 aaKnown RBP12.85□□□□□ -0.35
SPG11-203ENST00000535302 KBTBD2Q8IY47 623 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 FAM84AQ96KN4 292 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 SH3GLB1Q9Y371 365 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 RBM7Q9Y580 266 aaKnown RBP12.85□□□□□ -0.35
SPG11-203ENST00000535302 TNS2Q63HR2 1409 aa12.85□□□□□ -0.35
SPG11-203ENST00000535302 PIK3C2BO00750 1634 aa12.84□□□□□ -0.35
SPG11-203ENST00000535302 KPNA3O00505 521 aaPredicted RBP12.84□□□□□ -0.35
SPG11-203ENST00000535302 SMARCD1Q96GM5 515 aa12.84□□□□□ -0.35
SPG11-203ENST00000535302 TBC1D13Q9NVG8 400 aa12.84□□□□□ -0.35
SPG11-203ENST00000535302 KIAA1257Q9ULG3 409 aa12.84□□□□□ -0.35
SPG11-203ENST00000535302 A0A0A6YYK5 440 aaPredicted RBP12.84□□□□□ -0.35
SPG11-203ENST00000535302 VGLL4Q14135 290 aa12.84□□□□□ -0.35
SPG11-203ENST00000535302 CYP4Z2PQ8N1L4 340 aa12.84□□□□□ -0.35
SPG11-203ENST00000535302 ACTRT1Q8TDG2 376 aa12.84□□□□□ -0.35
SPG11-203ENST00000535302 HTR3CQ8WXA8 447 aa12.84□□□□□ -0.35
SPG11-203ENST00000535302 UBAP1Q9NZ09 502 aa12.84□□□□□ -0.35
SPG11-203ENST00000535302 DLC1Q96QB1 1528 aa12.84□□□□□ -0.35
SPG11-203ENST00000535302 F8VP50 259 aa12.84□□□□□ -0.35
SPG11-203ENST00000535302 BTN3A1O00481 513 aa12.84□□□□□ -0.35
SPG11-203ENST00000535302 DDX3XO00571 662 aaKnown RBP eCLIP12.84□□□□□ -0.35
SPG11-203ENST00000535302 UBDO15205 165 aa12.84□□□□□ -0.35
SPG11-203ENST00000535302 RIPK2O43353 540 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms