RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 SPIDRQ14159 915 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 SYT12Q8IV01 421 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 SENP8Q96LD8 212 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 GAD1Q99259 594 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 ULBP1Q9BZM6 244 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 RHBGQ9H310 441 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 ARL15Q9NXU5 204 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 E7ENQ6 273 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 DGKAP23743 735 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 PSMB9P28065 219 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 STX4Q12846 297 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 CES3Q6UWW8 571 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 SPATA20Q8TB22 786 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 QRFPRQ96P65 431 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 BDH2Q9BUT1 245 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 CDHR5Q9HBB8 845 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 NDUFA13Q9P0J0 144 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 ANKDD1BA6NHY2 528 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 SEMA4DQ92854 862 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 ZNF558Q96NG5 402 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 ZFYVE1Q9HBF4 777 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 LRRC4BQ9NT99 713 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 TRAV19A0A0A6YYK7 116 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 PIPSLA2A3N6 862 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 ZNF862O60290 1169 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 RECQL4O94761 1208 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 C11orf88Q6PI97 169 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 DHFR2Q86XF0 187 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 DNAAF5Q86Y56 855 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 SPRTNQ9H040 489 aaPredicted RBP18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 HDHD2Q9H0R4 259 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 POMKQ9H5K3 350 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 CATSPERZQ9NTU4 200 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 TSC22D4Q9Y3Q8 395 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 SESN1Q9Y6P5 492 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 PTPN4P29074 926 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 USP50Q70EL3 339 aaPredicted RBP18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 PIK3R5Q8WYR1 880 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 PROX1Q92786 737 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 FAM126AQ9BYI3 521 aaPredicted RBP18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 SOHLH2Q9NX45 425 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 LIMD1Q9UGP4 676 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 N6AMT1Q9Y5N5 214 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 A0A087X1B8 175 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 MOXD2PA6NHM9 499 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 HS6ST1O60243 411 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 UQCRBP14927 111 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 HOXB8P17481 243 aaPredicted RBP18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 NTSP30990 170 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 NOL9Q5SY16 702 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 KCNT2Q6UVM3 1135 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 APOPT1Q96IL0 206 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 UROC1Q96N76 676 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 TMEM79Q9BSE2 394 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 HGH1Q9BTY7 390 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 C2orf49Q9BVC5 232 aaPredicted RBP18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 TRIT1Q9H3H1 467 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 USP20Q9Y2K6 914 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 DIP2AQ14689 1571 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 FRMPD4Q14CM0 1322 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 TMEM150BA6NC51 233 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 CHURC1-FNTBB4DL54 471 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 SH3BGRLO75368 114 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 AMD1P17707 334 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 TKTP29401 623 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 ATP12AP54707 1039 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 ACAP1Q15027 740 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 GPSM1Q86YR5 675 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 KLHL1Q9NR64 748 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 HMGCRP04035 888 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 SERPINH1P50454 418 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 ACSM2AQ08AH3 577 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 NAB1Q13506 487 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 TAF13Q15543 124 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 ACSM2BQ68CK6 577 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 SCARA3Q6AZY7 606 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 RBM43Q6ZSC3 357 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 ASB2Q96Q27 587 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 LACRTQ9GZZ8 138 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 SLITRK2Q9H156 845 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 NUDT5Q9UKK9 219 aa18.48■□□□□ 0.55
SFSWAP-203ENST00000535236 E5RJQ4 531 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 INPP4BO15327 924 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 RIPK2O43353 540 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 KIAA0895Q8NCT3 520 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 UGT2B28Q9BY64 529 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 DCLRE1BQ9H816 532 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 DIABLOQ9NR28 239 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 KCNQ5Q9NR82 932 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 MYPNQ86TC9 1320 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 CATP04040 527 aaKnown RBP18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 MIPP30301 263 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 S100A3P33764 101 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 SCNN1GP51170 649 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 MFSD7Q6UXD7 560 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 DNAJC14Q6Y2X3 702 aaPredicted RBP18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 ZNF621Q6ZSS3 439 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 ACTRT2Q8TDY3 377 aa18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 ZBTB45Q96K62 511 aaPredicted RBP18.47■□□□□ 0.55
SFSWAP-203ENST00000535236 THAP1Q9NVV9 213 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms