RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 CPOXP36551 454 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 CDH15P55291 814 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 LSM12Q3MHD2 195 aaKnown RBP16.24■□□□□ 0.19
MCF2L-232ENST00000535094 ARL13AQ5H913 290 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-232ENST00000535094 URGCPQ8TCY9 931 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 ERLEC1Q96DZ1 483 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 PHF21BQ96EK2 531 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 SPATA13Q96N96 652 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 DTLQ9NZJ0 730 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 CNTN6Q9UQ52 1028 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 MAFBQ9Y5Q3 323 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-232ENST00000535094 TMEM233B4DJY2 109 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 BUD23O43709 281 aaKnown RBP16.24■□□□□ 0.19
MCF2L-232ENST00000535094 MFSD11O43934 449 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 CD1EP15812 388 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 CNTFP26441 200 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 TPD52P55327 224 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-232ENST00000535094 MAP3K10Q02779 954 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 POU6F1Q14863 301 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 PITRM1Q5JRX3 1037 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 CLVS1Q8IUQ0 354 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-232ENST00000535094 SLC7A14Q8TBB6 771 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 HDAC11Q96DB2 347 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 TBCBQ99426 244 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 MRPL45Q9BRJ2 306 aaKnown RBP16.24■□□□□ 0.19
MCF2L-232ENST00000535094 ACE2Q9BYF1 805 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-232ENST00000535094 PTPRHQ9HD43 1115 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 ATAD5Q96QE3 1844 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 HMX2A2RU54 273 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 RGSL1A5PLK6 1076 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 C9JVG2 144 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 EEF2KO00418 725 aaKnown RBP16.23■□□□□ 0.19
MCF2L-232ENST00000535094 FOXD2O60548 495 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-232ENST00000535094 MAFO75444 373 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-232ENST00000535094 IL18RAPO95256 599 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 DPEP1P16444 411 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 ACAT1P24752 427 aaKnown RBP16.23■□□□□ 0.19
MCF2L-232ENST00000535094 BAG6P46379 1132 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 LSAMPQ13449 338 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 ITPRIPL1Q6GPH6 555 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 FSTL4Q6MZW2 842 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 GK5Q6ZS86 529 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 TP53INP2Q8IXH6 220 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 DEFB106AQ8N104 65 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 IPMKQ8NFU5 416 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 THAP11Q96EK4 314 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 MPHOSPH6Q99547 160 aaKnown RBP16.23■□□□□ 0.19
MCF2L-232ENST00000535094 TRPC7Q9HCX4 862 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 ZNF214Q9UL59 606 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-232ENST00000535094 FNDC3AQ9Y2H6 1198 aaKnown RBP16.23■□□□□ 0.19
MCF2L-232ENST00000535094 STRNO43815 780 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 NOL3O60936 208 aaKnown RBP16.23■□□□□ 0.19
MCF2L-232ENST00000535094 SNNO75324 88 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-232ENST00000535094 JCHAINP01591 159 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 LRRC8BQ6P9F7 803 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 SPNS2Q8IVW8 549 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 PKP2Q99959 881 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 EFHD1Q9BUP0 239 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 CHRAC1Q9NRG0 131 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 CITO14578 2027 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 BCLAF3A2AJT9 711 aaKnown RBP16.23■□□□□ 0.19
MCF2L-232ENST00000535094 MAGEB3O15480 346 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 ADCY6O43306 1168 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 MCF2P10911 925 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 RNF111Q6ZNA4 994 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 ZBTB49Q6ZSB9 765 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 CATSPER4Q7RTX7 472 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 TSPAN14Q8NG11 270 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 ELMO2Q96JJ3 720 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 HAUS8Q9BT25 410 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 PIF1Q9H611 641 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 LRRC40Q9H9A6 602 aa16.23■□□□□ 0.19
MCF2L-232ENST00000535094 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.23■□□□□ 0.19
MCF2L-232ENST00000535094 CCNT2O60583 730 aaKnown RBP16.22■□□□□ 0.19
MCF2L-232ENST00000535094 DNAJA2O60884 412 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 FARP2O94887 1054 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-232ENST00000535094 PABPC4LP0CB38 370 aaKnown RBP16.22■□□□□ 0.19
MCF2L-232ENST00000535094 MTX3Q5HYI7 312 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 KCNMB4Q86W47 210 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 NUP93Q8N1F7 819 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 UBR7Q8N806 425 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 PDZD8Q8NEN9 1154 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 KCTD15Q96SI1 283 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-232ENST00000535094 UPF3AQ9H1J1 476 aaKnown RBP16.22■□□□□ 0.19
MCF2L-232ENST00000535094 DFFAO00273 331 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 RPL14P50914 215 aaKnown RBP16.22■□□□□ 0.19
MCF2L-232ENST00000535094 CTBP1Q13363 440 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 SLC12A1Q13621 1099 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 KIZQ2M2Z5 673 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 SLC9A4Q6AI14 798 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 RPS27LQ71UM5 84 aaKnown RBP16.22■□□□□ 0.19
MCF2L-232ENST00000535094 CATSPER1Q8NEC5 780 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 CRCPO75575 148 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 SLC4A1P02730 911 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 ASLP04424 464 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 HDCP19113 662 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 TFEBP19484 476 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 TPI1P60174 286 aa16.22■□□□□ 0.19
MCF2L-232ENST00000535094 EN1Q05925 392 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-232ENST00000535094 PCSK7Q16549 785 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms