RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 TP53BP1Q12888 1972 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 DOCK4Q8N1I0 1966 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 A0A1B0GVT2 93 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 ERVH48-1M5A8F1 160 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 FOXN3O00409 490 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 TRUB2O95900 331 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 ATP5BP06576 529 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 POLR2EP19388 210 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 ERCC5P28715 1186 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 HNF1BP35680 557 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 GRK6P43250 576 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 CSNK1EP49674 416 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 CLDN6P56747 220 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 RPS14P62263 151 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 ARID5AQ03989 594 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 ZBTB16Q05516 673 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 KCNMA1Q12791 1236 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 MAN2A1Q16706 1144 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 FNDC3BQ53EP0 1204 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 DCAF6Q58WW2 860 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 ZC3H12AQ5D1E8 599 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 MFN1Q8IWA4 741 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 ZNF366Q8N895 744 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 HJURPQ8NCD3 748 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 BTN2A3PQ96KV6 586 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 PCED1AQ9H1Q7 454 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 STIM2Q9P246 746 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 SUN2Q9UH99 717 aa10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 EIF2B4Q9UI10 523 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-203ENST00000534830 PLXNA2O75051 1894 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 ITIH6Q6UXX5 1313 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 LUC7L3O95232 432 aaKnown RBP10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 ASLP04424 464 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 ACADMP11310 421 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 TACR2P21452 398 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 ACSL1P33121 698 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 CSKP41240 450 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 MTIF2P46199 727 aaKnown RBP10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 CCDC173Q0VFZ6 552 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 DPCR1Q3MIW9 517 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 PITRM1Q5JRX3 1037 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 EFHC1Q5JVL4 640 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 OLFML1Q6UWY5 402 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 MMS22LQ6ZRQ5 1243 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 CREBRFQ8IUR6 639 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 FAM71AQ8IYT1 594 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 DEFB106AQ8N104 65 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 CFAP52Q8N1V2 620 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 ZNF397Q8NF99 534 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 SNX19Q92543 992 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 PPP1R13BQ96KQ4 1090 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 ORAI3Q9BRQ5 295 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 RSPH9Q9H1X1 276 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 NDST4Q9H3R1 872 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 FTSJ1Q9UET6 329 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 DNAJC12Q9UKB3 198 aa10.4□□□□□ -0.74
CLSTN3-203ENST00000534830 DOCK9Q9BZ29 2069 aa10.4□□□□□ -0.75
CLSTN3-203ENST00000534830 MYLKQ15746 1914 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 TYW5A2RUC4 315 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 B8ZZF3 427 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 KCNK3O14649 394 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 WISP1O95388 367 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 MOCS2O96007 188 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 APOEP02649 317 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 ERBB2P04626 1255 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 SRPRAP08240 638 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 PRKCSHP14314 528 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 CDH5P33151 784 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 USP8P40818 1118 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 CTSOP43234 321 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 GABRB2P47870 512 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 VASPP50552 380 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 PLK1P53350 603 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 PTK2Q05397 1052 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 KIF19Q2TAC6 998 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 HNRNPA1L2Q32P51 320 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 C5orf22Q49AR2 442 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 PTPN20Q4JDL3 420 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 VWA3BQ502W6 1294 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 CT47A1Q5JQC4 288 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 C9orf64Q5T6V5 341 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 RAP1GAP2Q684P5 730 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 C11orf57Q6ZUT1 292 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 FAM183BPQ6ZVS7 135 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 SLC26A9Q7LBE3 791 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 SLC47A2Q86VL8 602 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 APCDD1Q8J025 514 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 LGI2Q8N0V4 545 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 CARNMT1Q8N4J0 409 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 ATP6V0D2Q8N8Y2 350 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 SNIP1Q8TAD8 396 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 FGF11Q92914 225 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 ALG14Q96F25 216 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 TUBGCP2Q9BSJ2 902 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 NAA15Q9BXJ9 866 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 MTG2Q9H4K7 406 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 C6orf106Q9H6K1 298 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 OSGEPQ9NPF4 335 aa10.39□□□□□ -0.75
CLSTN3-203ENST00000534830 ERVW-1Q9UQF0 538 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms